Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3964

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1012927 to 1013924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1014027 to 1014928 12332 mRNA_3965: 12333 - Hypothetical Protein, at 1015715 to 1016506 12333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,013,035 - 12331 mRNA_3963 0.11 -0.3
1,013,608 + 12331 mRNA_3963 0.68 -1.4
1,013,620 - 12331 mRNA_3963 0.69 -0.1
1,013,628 + 12331 mRNA_3963 0.70 -0.4
1,014,066 - 0.8
1,014,507 + 12332 mRNA_3964 0.53 -0.5
1,014,532 + 12332 mRNA_3964 0.56 0.1
1,014,634 - 12332 mRNA_3964 0.67 -1.5
1,014,639 + 12332 mRNA_3964 0.68 1.9
1,014,661 - 12332 mRNA_3964 0.70 1.5
1,014,681 + 12332 mRNA_3964 0.73 1.0
1,014,725 + 12332 mRNA_3964 0.77 0.6
1,014,823 + 12332 mRNA_3964 0.88 0.6
1,014,824 + 12332 mRNA_3964 0.88 0.5
1,014,940 + 0.4
1,014,951 + 0.5
1,014,955 - 0.4
1,014,956 - 0.3
1,014,956 + -0.0
1,014,956 + 1.1
1,014,966 + -1.1
1,014,968 - -0.3
1,014,968 - -0.6
1,014,969 + -0.1
1,014,969 + -0.4
1,014,972 - -0.5
1,014,977 + -0.1
1,014,978 + 0.6
1,014,979 + 0.3
1,014,984 + 0.7
1,014,993 - -0.7
1,015,005 + -0.2
1,015,009 - 2.0
1,015,014 + 1.5
1,015,121 + -0.9
1,015,131 + 0.7
1,015,250 - -0.1
1,015,255 - -1.0