Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3963

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3962: 12330 - K09647 IMP1 mitochondrial inner membrane protease subunit 1, at 1012069 to 1012859 12330 mRNA_3963: 12331 - HMMPfam-Domain of unknown function (DUF4504)-PF14953, at 1012927 to 1013924 12331 mRNA_3964: 12332 - Hypothetical Protein, at 1014027 to 1014928 12332

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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1,012,020 - -1.2
1,012,046 + 1.4
1,013,035 - 12331 mRNA_3963 0.11 -0.3
1,013,608 + 12331 mRNA_3963 0.68 -1.4
1,013,620 - 12331 mRNA_3963 0.69 -0.1
1,013,628 + 12331 mRNA_3963 0.70 -0.4
1,014,066 - 0.8
1,014,507 + 12332 mRNA_3964 0.53 -0.5
1,014,532 + 12332 mRNA_3964 0.56 0.1
1,014,634 - 12332 mRNA_3964 0.67 -1.5
1,014,639 + 12332 mRNA_3964 0.68 1.9
1,014,661 - 12332 mRNA_3964 0.70 1.5
1,014,681 + 12332 mRNA_3964 0.73 1.0
1,014,725 + 12332 mRNA_3964 0.77 0.6
1,014,823 + 12332 mRNA_3964 0.88 0.6
1,014,824 + 12332 mRNA_3964 0.88 0.5