Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3955

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3954: 12322 - KOG1426 FOG RCC1 domain, at 985055 to 988023 12322 mRNA_3955: 12323 - K02355 fusA, GFM, EFG elongation factor G, at 988308 to 991427 12323 mRNA_3956: 12324 - KOG1843 Uncharacterized conserved protein, at 991807 to 993961 12324

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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987,657 + 12322 mRNA_3954 0.88 -0.5
987,847 + 1.3
988,046 + -1.0
988,161 - 0.1
988,164 + -0.5
988,167 + 1.1
988,170 - -0.8
988,174 + -0.1
988,188 + -0.6
988,199 + -0.1
989,157 - 12323 mRNA_3955 0.27 -3.0
991,503 - 0.1
991,978 - 2.4
992,291 + 12324 mRNA_3956 0.22 0.6
992,293 - 12324 mRNA_3956 0.23 2.0
992,427 + 12324 mRNA_3956 0.29 -1.5