Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3743

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3742: 12110 - SMART-Parallel beta-helix repeats-SM00710,SUPERFAMILY--SSF51126, at 474492 to 476469 12110 mRNA_3743: 12111 - K15289 SLC35F5 solute carrier family 35, member F5, at 476780 to 478513 12111

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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475,797 - 12110 mRNA_3742 0.66 1.7
476,274 + -0.1
476,501 - -1.7
476,545 + -0.8
476,550 + -0.2
476,724 - -0.6
477,006 + 12111 mRNA_3743 0.13 1.9
477,010 + 12111 mRNA_3743 0.13 -0.2
477,031 + 12111 mRNA_3743 0.14 0.1
477,693 + 12111 mRNA_3743 0.53 0.2
477,860 - 12111 mRNA_3743 0.62 -0.1
477,875 - 12111 mRNA_3743 0.63 0.0
477,889 + 12111 mRNA_3743 0.64 -0.7
478,181 - 12111 mRNA_3743 0.81 0.1
478,309 - 12111 mRNA_3743 0.88 0.1
478,312 + 12111 mRNA_3743 0.88 0.4
478,324 + 12111 mRNA_3743 0.89 -0.1
478,589 + -0.4
478,592 + -0.1
478,594 - 1.3
478,603 + 0.7
478,606 - -0.5
478,645 - 0.0
478,764 - -0.3
478,764 + -0.2
478,772 + 1.5
478,772 + 1.2
478,785 - 0.3
478,882 - -0.2
478,899 - 0.9
478,899 - -1.1
478,899 - 1.3
478,899 - 0.2
478,904 + 1.0
478,908 + -1.0
478,908 + 0.7
478,935 + -0.2
478,943 + 2.5
479,380 + 0.4
479,504 + 0.2
479,511 + -0.8