Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3692

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3691: 12059 - K11839 USP8, UBP5 ubiquitin carboxyl-terminal hydrolase 8, at 366206 to 370520 12059 mRNA_3692: 12060 - K04371 MAPK1_3 mitogen-activated protein kinase 1/3, at 370780 to 372675 12060 mRNA_3693: 12061 - K01714 dapA 4-hydroxy-tetrahydrodipicolinate synthase, at 373119 to 374635 12061

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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370,577 - 0.3
370,582 + 2.0
370,997 + 12060 mRNA_3692 0.11 1.2
371,096 - 12060 mRNA_3692 0.17 1.7
372,187 + 12060 mRNA_3692 0.74 0.1
372,318 - 12060 mRNA_3692 0.81 -0.9
372,775 + 0.8
373,050 + 0.0
373,239 - 0.1
373,239 + -0.8