Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3688

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3687: 12055 - K14837 NOP12 nucleolar protein 12, at 349923 to 352122 12055 mRNA_3688: 12056 - KOG4285 Mitotic phosphoprotein, at 352283 to 353789 12056 mRNA_3689: 12057 - Hypothetical Protein, at 354043 to 355679 12057

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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351,489 - 12055 mRNA_3687 0.71 1.6
351,950 + 0.4
352,197 - 1.1
352,213 - -1.1
352,228 + -1.3
352,407 + -0.6
352,533 - 12056 mRNA_3688 0.17 -0.2
352,671 - 12056 mRNA_3688 0.26 0.9
352,798 + 12056 mRNA_3688 0.34 -0.5
353,504 + 12056 mRNA_3688 0.81 -2.1
353,799 + -0.1
353,845 - -0.4
353,865 + 1.7
353,876 - -0.2
353,877 - -0.7
353,877 - 0.7
353,883 - -0.1
353,884 - 1.6
353,889 - 0.2
353,890 - -2.4
353,892 + 0.3
353,892 + 1.4
353,896 + 0.2
353,897 - -2.6
353,903 - -0.0
354,062 + -0.3
354,197 + 0.1
354,452 + 12057 mRNA_3689 0.25 0.3