Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3644

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3644: 12012 - Hypothetical Protein, at 242655 to 243950 12012 mRNA_3645: 12013 - K14439 SMARCAD1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1, at 244941 to 247626 12013

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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241,820 - -0.3
241,822 + -0.1
241,836 + -1.4
241,965 + -0.0
241,967 + -0.9
241,991 + -0.2
241,995 + -0.5
242,098 - -0.2
242,115 - 0.1
242,122 + 0.0
242,123 - 1.9
242,132 - 2.4
242,143 + -1.8
242,144 + -1.4
242,146 - -1.1
242,259 + -0.1
242,302 + 1.2
242,306 + 0.8
242,409 + -1.3
242,524 - 0.3
242,669 - -0.1
242,725 - 1.8
242,726 + 1.4
242,911 + 12012 mRNA_3644 0.20 0.5
243,065 - 12012 mRNA_3644 0.32 0.3
243,127 - 12012 mRNA_3644 0.36 -0.7
243,160 - 12012 mRNA_3644 0.39 0.9
243,462 + 12012 mRNA_3644 0.62 1.0
243,573 + 12012 mRNA_3644 0.71 0.0
244,103 + 0.0
244,141 - -0.6
244,152 + 1.5
244,171 - 1.8
244,285 + -0.2
244,311 + -1.3
244,327 + -1.1
244,411 + -0.2
244,423 + -0.6
244,435 - 1.7
244,443 + 0.6
244,451 + 0.4
244,576 - 0.3
244,580 + -1.4
244,587 + 1.0
244,591 - 1.3
244,593 - 0.3
244,697 - 0.1
244,722 + 1.9
244,731 + -0.0
244,734 - -1.4
244,742 + -0.1
244,753 + 0.3
244,759 + -0.5
244,763 - -0.0
244,780 + -0.3
244,784 - 1.4
244,785 + -2.2
244,886 + 1.2
244,898 - 0.9
244,949 + -0.8