Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3607

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3606: 11974 - HMMPfam-Tho complex subunit 7-PF05615, at 158142 to 159312 11974 mRNA_3607: 11975 - BLAST putative transmembrane protein [Rhizoctonia solani 123E], at 159428 to 160353 11975 mRNA_3608: 11976 - Hypothetical Protein, at 161019 to 162088 11976

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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158,573 - 11974 mRNA_3606 0.37 -1.4
158,579 - 11974 mRNA_3606 0.37 -0.7
158,919 - 11974 mRNA_3606 0.66 0.7
159,068 - 11974 mRNA_3606 0.79 0.2
159,341 - 0.2
159,349 - 1.0
159,350 + -1.9
159,385 + -0.1
159,619 - 11975 mRNA_3607 0.21 0.4
159,638 - 11975 mRNA_3607 0.23 -0.9
159,660 - 11975 mRNA_3607 0.25 -0.6
159,663 - 11975 mRNA_3607 0.25 0.6
159,930 - 11975 mRNA_3607 0.54 0.8
159,960 + 11975 mRNA_3607 0.57 1.3
160,202 + 11975 mRNA_3607 0.84 -0.1
160,222 + 11975 mRNA_3607 0.86 -0.7
160,470 - 0.9
160,508 + -2.5
160,515 - -0.2
160,686 + 0.3
160,813 - 0.5
161,184 - 11976 mRNA_3608 0.15 -0.3
161,232 + 11976 mRNA_3608 0.20 -0.2