Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3584

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3583: 11951 - Hypothetical Protein, at 104086 to 104307 11951 mRNA_3584: 11952 - K00122 FDH formate dehydrogenase, at 104607 to 106241 11952 mRNA_3585: 11953 - KOG1339 Aspartyl protease, at 106973 to 108703 11953

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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103,709 + -0.1
103,715 - -0.7
103,715 - 0.1
103,717 - -1.1
103,734 + 1.4
103,876 - 0.8
104,015 + 0.1
104,134 - 11951 mRNA_3583 0.22 1.8
104,146 + 11951 mRNA_3583 0.27 1.3
104,147 - 11951 mRNA_3583 0.27 0.0
104,888 + 11952 mRNA_3584 0.17 -0.4
104,889 + 11952 mRNA_3584 0.17 0.4
105,172 - 11952 mRNA_3584 0.35 -0.8
105,276 - 11952 mRNA_3584 0.41 0.2
106,048 - 11952 mRNA_3584 0.88 0.2
106,160 - -0.3
106,325 - 0.2
106,343 - 1.2
106,344 - 0.4
106,348 + -0.4
106,352 - 0.3
106,359 + 0.8
106,362 + 0.0
106,362 + 0.5
106,373 - -1.6
106,379 + -0.3
106,380 + 1.3
106,388 + -0.4
106,397 + 0.8
106,400 - 0.2
106,412 + 1.5
106,412 - -0.1
106,416 + -0.7
106,417 + -0.4
106,441 - -0.3
106,445 + 0.5
106,459 - -0.6
106,489 + 0.1
106,490 - -0.1
106,500 - 0.9
106,505 - -0.5
106,507 + 2.0
106,511 - 1.1
106,519 + -1.1
106,541 - -1.2
106,542 + -0.4
106,555 + -0.8
106,654 + 1.5
106,799 - -0.0
106,808 - 0.5
106,822 + 0.7
107,061 - 0.4
107,107 + -1.1