Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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2 + 0.4
2 + 0.8
2 + -1.6
2 + 2.1
2 + 0.5
2 + -0.1
2 + 0.7
14 + 0.1
26 + 0.5
36 + -0.4
39 + 0.7
42 - 0.7
50 + -0.8
50 + 0.4
50 + 0.3
53 - -0.2
57 + -0.5
59 - -0.0
103 + 0.5
104 + 2.5
112 + -0.9
117 - 0.3
120 - 1.1
140 - -0.5
141 + 0.2
146 + 0.3
150 + 0.1
199 - 11905 mRNA_3537 0.12 -1.5
200 + 11905 mRNA_3537 0.12 -0.9
200 - 11905 mRNA_3537 0.12 -0.7
200 - 11905 mRNA_3537 0.12 -0.8
200 - 11905 mRNA_3537 0.12 -0.9
201 - 11905 mRNA_3537 0.12 -0.4
207 + 11905 mRNA_3537 0.13 1.1
207 + 11905 mRNA_3537 0.13 1.2
207 + 11905 mRNA_3537 0.13 -1.2
209 + 11905 mRNA_3537 0.13 -0.0
210 + 11905 mRNA_3537 0.13 -1.0
213 + 11905 mRNA_3537 0.14 -0.2
213 + 11905 mRNA_3537 0.14 -1.3
214 + 11905 mRNA_3537 0.14 0.2
214 + 11905 mRNA_3537 0.14 -0.2
218 + 11905 mRNA_3537 0.14 -0.7
221 + 11905 mRNA_3537 0.15 -0.0
222 + 11905 mRNA_3537 0.15 0.0
222 + 11905 mRNA_3537 0.15 0.3
222 + 11905 mRNA_3537 0.15 -2.1
223 - 11905 mRNA_3537 0.15 -0.4
225 - 11905 mRNA_3537 0.15 -3.0
227 - 11905 mRNA_3537 0.15 -0.5
227 + 11905 mRNA_3537 0.15 0.2
230 + 11905 mRNA_3537 0.16 2.6
230 + 11905 mRNA_3537 0.16 0.6
246 - 11905 mRNA_3537 0.18 -0.4
246 - 11905 mRNA_3537 0.18 -1.1
251 + 11905 mRNA_3537 0.18 -1.6
252 + 11905 mRNA_3537 0.18 0.3
260 + 11905 mRNA_3537 0.19 0.1
262 + 11905 mRNA_3537 0.20 -3.1
265 - 11905 mRNA_3537 0.20 0.7
272 - 11905 mRNA_3537 0.21 -0.1
274 + 11905 mRNA_3537 0.21 -1.1
325 - 11905 mRNA_3537 0.27 -0.3
326 - 11905 mRNA_3537 0.27 0.3
341 + 11905 mRNA_3537 0.29 0.5
359 + 11905 mRNA_3537 0.31 0.4
362 + 11905 mRNA_3537 0.32 1.3
367 - 11905 mRNA_3537 0.32 0.9
368 + 11905 mRNA_3537 0.33 2.0
368 + 11905 mRNA_3537 0.33 -0.2
368 + 11905 mRNA_3537 0.33 0.0
373 + 11905 mRNA_3537 0.33 0.4
373 - 11905 mRNA_3537 0.33 0.4
373 - 11905 mRNA_3537 0.33 0.2
379 + 11905 mRNA_3537 0.34 -0.4
380 + 11905 mRNA_3537 0.34 0.4
417 + 11905 mRNA_3537 0.39 -1.9
452 + 11905 mRNA_3537 0.43 0.9
472 + 11905 mRNA_3537 0.45 0.8
484 + 11905 mRNA_3537 0.47 -0.5
489 - 11905 mRNA_3537 0.47 -0.6
503 - 11905 mRNA_3537 0.49 2.7
511 + 11905 mRNA_3537 0.50 2.0
518 + 11905 mRNA_3537 0.51 -0.9
523 + 11905 mRNA_3537 0.52 0.5
533 + 11905 mRNA_3537 0.53 -0.3
539 + 11905 mRNA_3537 0.54 -0.7
550 + 11905 mRNA_3537 0.55 0.3
579 + 11905 mRNA_3537 0.58 0.5
638 - 11905 mRNA_3537 0.66 -2.8
640 - 11905 mRNA_3537 0.66 -1.4
657 + 11905 mRNA_3537 0.68 0.2
762 - 11905 mRNA_3537 0.81 -1.2
768 + 11905 mRNA_3537 0.82 0.1
791 - 11905 mRNA_3537 0.84 -0.7
801 + 11905 mRNA_3537 0.86 0.2
804 + 11905 mRNA_3537 0.86 0.1
822 + 11905 mRNA_3537 0.88 0.7
827 + 11905 mRNA_3537 0.89 -0.0
842 + -0.7
842 + 1.2
845 - 0.8
962 - -0.1
990 + -0.6
1,074 + -2.6
1,080 - -0.1
1,107 + -0.3
1,110 - -0.2
1,123 + -1.3
1,143 + 0.3
1,256 - 0.1
1,278 + -1.8
1,336 + 0.2
1,371 - -0.1
1,404 - 0.2
1,429 + -2.3
1,450 + -0.2
1,528 + 0.6
1,550 + 1.3
1,647 - -0.1
1,653 + 1.3
1,661 - 0.4
1,663 + -0.2
1,719 + -0.4
1,720 + 0.6
1,760 + 0.6
1,814 - 1.3
1,902 - -0.3