Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3472

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3471: 11839 - Interpro Transcription-silencing protein, cryptic loci regulator Clr2 Transcription-silencing protein Clr2, at 181846 to 184835 11839 mRNA_3472: 11840 - HMMPfam-Xylose isomerase-like TIM barrel-PF01261,SUPERFAMILY--SSF51658, at 185364 to 186603 11840 mRNA_3473: 11841 - K11578 ZW10, DSL1 protein transport protein DSL1/ZW10, at 186960 to 196280 11841

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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184,391 - 11839 mRNA_3471 0.85 -0.2
184,488 + 11839 mRNA_3471 0.88 -1.8
184,662 + -0.9
184,825 + 0.2
184,964 + 0.5
185,262 - 0.0
185,542 + 11840 mRNA_3472 0.14 -0.0
185,573 + 11840 mRNA_3472 0.17 1.6
185,689 + 11840 mRNA_3472 0.26 -0.2
185,693 - 11840 mRNA_3472 0.27 1.0
185,829 + 11840 mRNA_3472 0.38 -1.4
186,432 - 11840 mRNA_3472 0.86 0.1
186,527 - 2.1
186,561 - 0.0
186,571 + 0.3
186,575 - 0.2
186,578 + 0.4
186,581 - 0.9
186,587 + -1.1
186,710 + 3.2
186,735 - -0.6