Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3431

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3430: 11798 - Hypothetical Protein, at 81829 to 82404 11798 mRNA_3431: 11799 - K11155 DGAT1 diacylglycerol O-acyltransferase 1, at 82671 to 85458 11799

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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82,311 + 11798 mRNA_3430 0.84 -0.5
82,319 - 11798 mRNA_3430 0.85 0.5
82,322 + 11798 mRNA_3430 0.86 1.0
82,326 - 11798 mRNA_3430 0.86 0.6
82,328 - 11798 mRNA_3430 0.87 1.5
82,331 - 11798 mRNA_3430 0.87 -0.0
82,348 - -0.7
82,360 + -0.2
82,373 + 0.8
82,491 - 1.3
82,496 + 0.2
82,499 + 0.5
82,509 + -0.1
82,513 + -0.9
82,513 - 0.6
82,568 - -0.9
82,583 + 0.2
82,593 - -0.7
82,594 - 1.3
82,610 - 0.3
82,633 + -0.0
82,638 + 0.7
82,645 + -0.2
82,652 - -0.9
82,677 + -0.3
82,760 - 1.1
82,781 + -0.1
82,784 - 1.8
82,784 + 1.3
82,785 + 0.7
82,812 - 1.4
83,247 + 11799 mRNA_3431 0.21 0.1
83,530 - 11799 mRNA_3431 0.31 1.7
83,677 + 11799 mRNA_3431 0.36 0.5
83,965 + 11799 mRNA_3431 0.46 0.5
84,202 + 11799 mRNA_3431 0.55 0.3
84,693 + 11799 mRNA_3431 0.73 -0.4
84,832 + 11799 mRNA_3431 0.78 0.0
84,836 - 11799 mRNA_3431 0.78 -0.6
84,959 + 11799 mRNA_3431 0.82 -0.0
85,139 + 11799 mRNA_3431 0.89 0.3
85,527 - 3.3
85,532 - 1.1
85,534 + 0.3
85,537 - 0.2
85,552 - 0.5
85,566 + 1.5
85,590 - 0.5
85,677 - 0.0
85,680 - 1.1
85,713 + 0.5
85,728 + 0.0
85,756 - 0.4
85,937 - 0.2
85,979 - 1.2
85,999 - 0.3
86,004 + -0.7
86,133 + -0.4
86,253 + 0.4
86,256 - -1.1
86,280 + -0.2
86,285 - 0.7