Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3360

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3359: 11727 - Hypothetical Protein, at 492217 to 492797 11727 mRNA_3360: 11728 - KOG4836 Uncharacterized conserved protein, at 493196 to 494520 11728 mRNA_3361: 11729 - K11247 SH3GL endophilin-A, at 494941 to 495602 11729

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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492,229 - 0.4
492,243 - -0.5
492,307 + 11727 mRNA_3359 0.15 1.0
492,323 + 11727 mRNA_3359 0.18 -0.5
492,339 + 11727 mRNA_3359 0.21 -0.5
492,805 + -0.8
493,077 + 0.6
493,444 - 11728 mRNA_3360 0.19 1.4
493,688 - 11728 mRNA_3360 0.37 -0.7
493,879 - 11728 mRNA_3360 0.52 0.1
493,928 - 11728 mRNA_3360 0.55 0.5
494,204 - 11728 mRNA_3360 0.76 -0.5
494,214 - 11728 mRNA_3360 0.77 -0.2
494,245 - 11728 mRNA_3360 0.79 -0.9
494,269 - 11728 mRNA_3360 0.81 0.7
494,398 - -0.5
494,407 - 0.0
494,414 - -1.2
494,534 + -0.0
494,547 - 0.4
494,572 + 0.9
494,846 + -0.5
495,112 - 11729 mRNA_3361 0.26 0.6
495,158 + 11729 mRNA_3361 0.33 -0.1
495,239 - 11729 mRNA_3361 0.45 1.1
495,284 + 11729 mRNA_3361 0.52 -0.6