Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3346

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3345: 11713 - Hypothetical Protein, at 436771 to 439819 11713 mRNA_3346: 11714 - K19844 BEM2 GTPase-activating protein BEM2, at 440091 to 443147 11714

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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439,202 + 11713 mRNA_3345 0.80 0.4
439,206 + 11713 mRNA_3345 0.80 -0.3
439,210 - 11713 mRNA_3345 0.80 0.2
439,669 + -0.4
440,206 - 0.2
440,257 - 0.5
440,368 - 0.1
440,395 - 0.8
440,653 - 11714 mRNA_3346 0.18 0.2
440,681 - 11714 mRNA_3346 0.19 1.7
441,217 - 11714 mRNA_3346 0.37 -0.7
441,705 + 11714 mRNA_3346 0.53 1.3
441,839 - 11714 mRNA_3346 0.57 -0.9
441,980 - 11714 mRNA_3346 0.62 1.0
442,443 + 11714 mRNA_3346 0.77 0.4
442,702 - 11714 mRNA_3346 0.85 0.3
442,732 - 11714 mRNA_3346 0.86 0.8
442,771 + 11714 mRNA_3346 0.88 0.7
442,888 - -1.7
443,054 + 0.8
443,193 - 1.3
443,199 - 0.3
443,205 - -0.5
443,333 - 0.1