Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3143

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3142: 11510 - K14663 NTA1 protein N-terminal amidase, at 414641 to 415857 11510 mRNA_3143: 11511 - K10133 TP53I3 tumor protein p53-inducible protein 3, at 415939 to 417358 11511 mRNA_3144: 11512 - Hypothetical Protein, at 417526 to 421368 11512

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
415,016 - 11510 mRNA_3142 0.31 0.5
415,147 - 11510 mRNA_3142 0.42 1.6
415,170 + 11510 mRNA_3142 0.43 -1.8
415,188 - 11510 mRNA_3142 0.45 0.8
415,281 - 11510 mRNA_3142 0.53 -1.3
415,295 - 11510 mRNA_3142 0.54 0.9
415,456 - 11510 mRNA_3142 0.67 -0.7
415,535 - 11510 mRNA_3142 0.73 0.1
415,629 - 11510 mRNA_3142 0.81 -0.3
415,642 + 11510 mRNA_3142 0.82 -1.4
415,643 + 11510 mRNA_3142 0.82 0.1
415,657 + 11510 mRNA_3142 0.83 -0.6
415,701 - 11510 mRNA_3142 0.87 0.9
415,794 - 2.5
415,796 - 0.9
415,830 - -0.2
415,861 + -0.1
415,909 + 1.9
415,935 - -0.9
416,077 + -0.6
416,364 + 11511 mRNA_3143 0.30 0.8
416,495 - 11511 mRNA_3143 0.39 0.2
416,634 - 11511 mRNA_3143 0.49 -0.7
416,758 - 11511 mRNA_3143 0.58 -0.7
416,791 + 11511 mRNA_3143 0.60 -0.9
416,807 + 11511 mRNA_3143 0.61 -1.4
416,884 - 11511 mRNA_3143 0.67 -0.0
416,914 - 11511 mRNA_3143 0.69 -0.4
416,955 + 11511 mRNA_3143 0.72 2.0
417,060 - 11511 mRNA_3143 0.79 1.0
417,093 + 11511 mRNA_3143 0.81 -0.0
417,095 + 11511 mRNA_3143 0.81 -1.6
417,197 - 11511 mRNA_3143 0.89 1.2
417,214 + 11511 mRNA_3143 0.90 1.9
417,228 - -0.9
417,239 + 0.7
417,250 - -0.4
417,378 - -0.8
417,383 - -0.3
417,385 + -0.4
417,392 - -1.5
417,392 + 1.5
417,395 - 0.0
417,396 - -0.9
417,396 - 0.1
417,398 - -2.5
417,402 - -0.1
417,405 + 0.2
417,423 + -0.3
417,427 + -0.5
417,431 - 0.6
417,436 - -0.4
417,446 - 0.3
417,449 - 0.2
417,454 + -0.5
417,462 + 0.9
417,463 + -0.3
417,478 + 1.1
417,495 - -0.1
417,557 + 0.3
417,576 + -1.5
417,607 - -0.4
417,609 + -0.7
417,616 - 0.3
417,776 - 0.1
417,777 + 0.4
417,955 + 11512 mRNA_3144 0.11 0.6
418,097 - 11512 mRNA_3144 0.15 -0.9