Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3106

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3105: 11473 - KOG1515 Arylacetamide deacetylase, at 334494 to 336059 11473 mRNA_3106: 11474 - BLAST potential peroxisomal matrix Pex8 protein [Pseudo..., at 336211 to 338758 11474 mRNA_3107: 11475 - K11412 SIRT2, SIR2L2 NAD-dependent deacetylase sirtuin 2, at 339155 to 340730 11475

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
335,744 + 11473 mRNA_3105 0.80 -0.1
335,862 - 11473 mRNA_3105 0.87 0.4
336,033 + -0.7
336,033 - 0.4
336,034 - -0.1
336,036 + -0.1
336,061 - 0.3
336,077 + 0.6
336,140 - -0.8
336,147 - 0.0
336,159 - 0.7
336,161 - -0.0
336,170 - 1.0
336,173 + 1.0
336,175 - -1.4
336,178 + 1.1
336,187 - 1.5
336,190 + -0.2
336,198 + 0.1
336,205 - -1.4
336,205 + 0.2
336,312 - -0.7
336,323 + -0.4
336,327 + -2.0
336,329 + -0.0
336,341 - -1.7
336,345 + 1.2
336,457 - 0.0
336,459 + 1.3
336,481 - 11474 mRNA_3106 0.11 -1.7
336,485 + 11474 mRNA_3106 0.11 -1.2
336,491 - 11474 mRNA_3106 0.11 -1.2
336,634 - 11474 mRNA_3106 0.17 -0.1
336,639 + 11474 mRNA_3106 0.17 -0.7
336,648 - 11474 mRNA_3106 0.17 1.6
336,649 - 11474 mRNA_3106 0.17 0.3
336,775 + 11474 mRNA_3106 0.22 0.1
336,787 - 11474 mRNA_3106 0.23 0.3
336,935 + 11474 mRNA_3106 0.28 1.5
337,067 - 11474 mRNA_3106 0.34 2.5
337,070 - 11474 mRNA_3106 0.34 1.2
337,070 - 11474 mRNA_3106 0.34 0.9
337,192 - 11474 mRNA_3106 0.39 -0.6
337,232 + 11474 mRNA_3106 0.40 1.4
337,614 + 11474 mRNA_3106 0.55 1.1
337,654 - 11474 mRNA_3106 0.57 -1.6
337,833 + 11474 mRNA_3106 0.64 0.3
337,956 - 11474 mRNA_3106 0.68 -1.2
337,958 + 11474 mRNA_3106 0.69 -0.1
337,961 + 11474 mRNA_3106 0.69 -0.7
338,104 - 11474 mRNA_3106 0.74 -0.9
338,269 + 11474 mRNA_3106 0.81 -0.5
338,282 - 11474 mRNA_3106 0.81 -0.9
338,289 + 11474 mRNA_3106 0.82 -2.5
338,382 - 11474 mRNA_3106 0.85 0.1
338,568 - 0.3
338,572 - -0.3
338,691 - -0.2
338,702 - -1.9
338,704 + 0.6
338,729 + -0.0
338,811 + 0.2
338,850 - 1.2
339,011 + -1.2
339,016 - -0.2
339,021 - 2.0
339,152 - -0.7
339,300 + -0.4
339,310 + -0.7
339,565 - 11475 mRNA_3107 0.26 1.0