Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3097

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3096: 11464 - K17262 TBCB, CKAP1, ALF1 tubulin-folding cofactor B, at 310272 to 311367 11464 mRNA_3097: 11465 - K00591 COQ3 polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase, at 311599 to 312739 11465 mRNA_3098: 11466 - ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 312938 to 315396 11466

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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310,692 + 11464 mRNA_3096 0.38 -0.0
310,693 + 11464 mRNA_3096 0.38 0.1
310,851 + 11464 mRNA_3096 0.53 0.4
310,993 - 11464 mRNA_3096 0.66 -0.5
311,068 - 11464 mRNA_3096 0.73 2.4
311,120 + 11464 mRNA_3096 0.77 -0.1
311,310 + 1.4
311,321 - -1.1
311,400 - 0.2
311,405 - 0.4
311,545 - 0.1
311,558 - -0.9
311,564 - 0.5
311,564 - -0.3
311,565 - 1.5
311,568 - -1.0
311,577 + -0.8
311,583 + -1.2
311,589 + -0.1
311,592 + 1.3
311,670 - 0.1
311,704 + -0.1
311,717 + 11465 mRNA_3097 0.10 0.3
311,725 + 11465 mRNA_3097 0.11 0.3
311,758 + 11465 mRNA_3097 0.14 0.2
311,850 - 11465 mRNA_3097 0.22 -0.5
311,869 - 11465 mRNA_3097 0.24 -1.2
312,026 - 11465 mRNA_3097 0.37 -1.5
312,032 + 11465 mRNA_3097 0.38 -1.1
312,136 + 11465 mRNA_3097 0.47 0.8
312,233 + 11465 mRNA_3097 0.56 -0.7
312,462 + 11465 mRNA_3097 0.76 -1.6
312,462 + 11465 mRNA_3097 0.76 1.3
312,469 + 11465 mRNA_3097 0.76 -0.6
312,472 - 11465 mRNA_3097 0.77 -0.1
312,597 - 11465 mRNA_3097 0.87 -1.0
312,803 + 1.8
312,910 + 0.1
312,913 + 0.7
312,935 + -0.3
312,980 - -1.0
313,058 + 1.1
313,212 - 11466 mRNA_3098 0.11 -0.8
313,214 + 11466 mRNA_3098 0.11 1.7
313,337 + 11466 mRNA_3098 0.16 0.3
313,452 + 11466 mRNA_3098 0.21 0.1
313,466 + 11466 mRNA_3098 0.21 -1.2
313,491 + 11466 mRNA_3098 0.22 -0.3
313,680 + 11466 mRNA_3098 0.30 0.7