Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3044

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3044: 11412 - K11771 SWI1, ADR6 SWI/SNF chromatin-remodeling complex subunit SWI1, at 177701 to 181469 11412

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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176,758 + -0.1
176,899 - -0.3
176,910 + 0.6
176,932 + 0.1
176,938 - 0.4
177,075 - -0.1
177,089 + 0.3
177,250 + -0.5
177,395 + 0.9
177,417 + -0.1
177,542 + 1.5
177,663 + -0.1
177,818 - -2.6
177,941 + 1.1
178,014 - -1.0
178,939 + 11412 mRNA_3044 0.33 -0.8
179,084 - 11412 mRNA_3044 0.37 2.0
179,272 - 11412 mRNA_3044 0.42 -2.1
179,552 - 11412 mRNA_3044 0.49 -1.6
179,563 - 11412 mRNA_3044 0.49 -1.8
179,570 + 11412 mRNA_3044 0.50 -1.7
179,701 - 11412 mRNA_3044 0.53 -2.0
179,808 + 11412 mRNA_3044 0.56 -1.5
180,261 + 11412 mRNA_3044 0.68 -3.3
180,464 + 11412 mRNA_3044 0.73 -1.4
181,025 - 11412 mRNA_3044 0.88 -1.5
181,237 + 0.3
181,468 + 0.9
181,547 + -2.0
181,961 - 2.6
182,153 - 0.1
182,254 + -1.4