Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2975

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2974: 11342 - HMMPfam-Major Facilitator Superfamily-PF07690,ProSiteProfiles-Major facilitator superfamily (MFS) profile.-PS50850,SUPERFAMILY--SSF103473, at 690635 to 692698 11342 mRNA_2975: 11343 - KOG3072 Long chain fatty acid elongase, at 693422 to 694637 11343 mRNA_2976: 11344 - KOG2592 Tumor differentially expressed (TDE) protein, at 694917 to 696801 11344

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
692,552 + -0.5
692,830 + -0.2
692,836 + -0.5
692,841 + 0.0
692,850 + 0.2
692,866 - 1.4
692,867 - -0.3
692,919 + 1.5
692,928 + -1.2
692,929 + -0.7
692,929 - 0.5
692,932 + 0.9
692,935 - -0.1
692,937 - -0.9
692,938 + 0.8
692,941 + 1.4
692,942 + 0.9
692,944 + 0.4
692,944 + 3.0
692,948 - 1.4
692,948 + 0.3
692,951 + 2.1
692,952 + 0.5
692,954 + 1.7
692,957 + -0.4
692,964 - 1.2
692,969 - 1.0
692,983 + 0.1
692,999 - -0.8
693,000 + -1.0
693,002 - 0.2
693,006 + 0.5
693,007 + 0.5
693,173 + 0.6
693,191 - -0.1
693,294 - 0.5
693,454 - 0.4
693,479 + 1.5
693,482 + -0.2
693,631 + 11343 mRNA_2975 0.17 -1.0
693,640 + 11343 mRNA_2975 0.18 1.0
693,647 - 11343 mRNA_2975 0.19 -0.8
693,654 - 11343 mRNA_2975 0.19 -0.3
693,655 + 11343 mRNA_2975 0.19 -0.6
693,682 + 11343 mRNA_2975 0.21 -0.2
693,753 + 11343 mRNA_2975 0.27 0.3
693,878 + 11343 mRNA_2975 0.38 -1.0
693,916 + 11343 mRNA_2975 0.41 -1.4
694,167 + 11343 mRNA_2975 0.61 -0.0
694,224 + 11343 mRNA_2975 0.66 -0.4
694,469 - 11343 mRNA_2975 0.86 1.6
694,567 + -1.2
694,615 - 0.7
694,735 + -0.7
694,738 + -1.3
694,813 - 1.0
695,016 - 1.0
695,025 + -0.0
695,041 - -0.1
695,097 + 0.9
695,607 - 11344 mRNA_2976 0.37 0.5
695,618 - 11344 mRNA_2976 0.37 1.3