Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2947

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2946: 11314 - SUPERFAMILY--SSF56112, at 619500 to 621824 11314 mRNA_2947: 11315 - Hypothetical Protein, at 622694 to 625091 11315 mRNA_2948: 11316 - K12817 PRPF18, PRP18 pre-mRNA-splicing factor 18, at 625370 to 627125 11316

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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621,703 + -1.2
621,735 - 0.2
621,804 + -0.5
621,821 + 0.2
621,965 - 0.1
621,992 - 0.5
622,016 + 0.4
622,134 + 0.7
622,134 + -1.1
622,463 + -0.3
622,720 - 1.8
622,834 + -0.9
622,839 + -2.0
623,093 - 11315 mRNA_2947 0.17 2.1
623,117 - 11315 mRNA_2947 0.18 -0.3
623,266 - 11315 mRNA_2947 0.24 -0.2
623,389 - 11315 mRNA_2947 0.29 0.3
623,421 + 11315 mRNA_2947 0.30 0.7
623,595 - 11315 mRNA_2947 0.38 1.3
623,714 + 11315 mRNA_2947 0.43 -0.5
623,717 - 11315 mRNA_2947 0.43 -1.0
623,841 - 11315 mRNA_2947 0.48 -0.2
623,857 - 11315 mRNA_2947 0.48 -0.0
623,975 + 11315 mRNA_2947 0.53 2.4
623,992 - 11315 mRNA_2947 0.54 0.2
624,077 + 11315 mRNA_2947 0.58 0.7
624,195 - 11315 mRNA_2947 0.63 0.1
624,222 + 11315 mRNA_2947 0.64 1.3
624,240 - 11315 mRNA_2947 0.64 -2.9
624,612 - 11315 mRNA_2947 0.80 1.1
624,684 - 11315 mRNA_2947 0.83 -1.3
624,704 - 11315 mRNA_2947 0.84 -0.3
624,707 + 11315 mRNA_2947 0.84 1.2
624,824 - 11315 mRNA_2947 0.89 -1.0
624,856 - -2.8
624,868 - 0.1
624,870 + 0.6
625,017 - 0.0
625,246 + -0.1
625,404 - -0.7