Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2899

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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487,989 - -0.3
488,154 + 0.0
488,224 - -0.4
488,235 - 1.6
488,262 + -0.2
488,372 - 1.0
488,389 + -0.1
488,506 - 0.3
488,521 + 0.7
488,534 + -1.0
488,556 + -0.7
488,650 - 0.9
488,712 - -1.0
488,719 + -0.9
488,766 + -0.0
488,806 + -0.2
488,807 - 1.2
488,935 - -0.8
488,937 + 2.5
488,969 - -3.0
488,970 + 0.4
488,997 + -0.8
489,000 + 0.0
489,038 - 0.7
489,553 + 11267 mRNA_2899 0.20 -0.6
489,675 + 11267 mRNA_2899 0.23 1.4
489,773 + 11267 mRNA_2899 0.27 0.1
489,878 - 11267 mRNA_2899 0.30 0.7
489,970 - 11267 mRNA_2899 0.33 0.4
489,988 - 11267 mRNA_2899 0.33 0.5
490,005 - 11267 mRNA_2899 0.34 1.5
490,995 - 11267 mRNA_2899 0.65 0.7
491,034 + 11267 mRNA_2899 0.67 0.4
491,116 + 11267 mRNA_2899 0.69 0.6
491,250 + 11267 mRNA_2899 0.73 -1.4
491,363 - 11267 mRNA_2899 0.77 1.7
491,396 - 11267 mRNA_2899 0.78 0.7
491,402 + 11267 mRNA_2899 0.78 0.3
491,825 - 0.5
492,271 + 0.5
492,515 - 0.1
492,597 + 0.1
492,607 + 1.6
492,686 - 0.0
492,716 - 0.5
492,778 + 0.1
492,872 - 1.2
492,889 + -0.8