Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2898

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2897: 11265 - K12613 DCP2 mRNA-decapping enzyme subunit 2, at 479604 to 482899 11265 mRNA_2898: 11266 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 483006 to 488500 11266 mRNA_2899: 11267 - K15276 SLC35B2, PAPST1 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2, at 488938 to 492084 11267

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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482,083 - 11265 mRNA_2897 0.75 0.1
482,400 + 11265 mRNA_2897 0.85 -1.8
482,553 + 11265 mRNA_2897 0.89 -0.3
482,737 + 0.3
482,761 + -0.1
483,214 + -0.3
483,340 + -0.2
483,425 + -0.2
483,430 - -0.5
483,566 - 11266 mRNA_2898 0.10 0.2
483,572 + 11266 mRNA_2898 0.10 0.7
483,583 - 11266 mRNA_2898 0.11 0.6
483,706 + 11266 mRNA_2898 0.13 -0.4
483,911 - 11266 mRNA_2898 0.16 1.0
483,990 + 11266 mRNA_2898 0.18 0.5
484,433 + 11266 mRNA_2898 0.26 -0.6
484,529 + 11266 mRNA_2898 0.28 -0.3
484,573 - 11266 mRNA_2898 0.29 -1.1
484,584 + 11266 mRNA_2898 0.29 0.1
484,730 + 11266 mRNA_2898 0.31 -0.0
484,894 + 11266 mRNA_2898 0.34 -0.2
484,992 + 11266 mRNA_2898 0.36 0.7
485,157 + 11266 mRNA_2898 0.39 0.4
485,163 + 11266 mRNA_2898 0.39 0.9
485,292 + 11266 mRNA_2898 0.42 -0.8
485,498 + 11266 mRNA_2898 0.45 0.9
485,617 + 11266 mRNA_2898 0.48 0.0
485,899 - 11266 mRNA_2898 0.53 -1.1
485,902 + 11266 mRNA_2898 0.53 -0.1
486,134 - 11266 mRNA_2898 0.57 0.2
486,167 - 11266 mRNA_2898 0.58 2.4
486,513 + 11266 mRNA_2898 0.64 0.3
486,786 - 11266 mRNA_2898 0.69 -0.5
486,789 + 11266 mRNA_2898 0.69 0.5
486,950 + 11266 mRNA_2898 0.72 -0.6
487,069 + 11266 mRNA_2898 0.74 1.2
487,357 + 11266 mRNA_2898 0.79 0.2
487,501 + 11266 mRNA_2898 0.82 -0.8
487,716 - 11266 mRNA_2898 0.86 -1.6
487,813 - 11266 mRNA_2898 0.87 0.5
487,989 - -0.3
488,154 + 0.0
488,224 - -0.4
488,235 - 1.6
488,262 + -0.2
488,372 - 1.0
488,389 + -0.1
488,506 - 0.3
488,521 + 0.7
488,534 + -1.0
488,556 + -0.7
488,650 - 0.9
488,712 - -1.0
488,719 + -0.9
488,766 + -0.0
488,806 + -0.2
488,807 - 1.2
488,935 - -0.8
488,937 + 2.5
488,969 - -3.0
488,970 + 0.4
488,997 + -0.8
489,000 + 0.0
489,038 - 0.7