Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2867

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2866: 11234 - ProSiteProfiles-Myb-like domain profile.-PS50090,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 397410 to 402844 11234 mRNA_2867: 11235 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 403264 to 404865 11235 mRNA_2868: 11236 - HMMPfam-GDSL-like Lipase/Acylhydrolase-PF00657,SUPERFAMILY--SSF52266, at 405461 to 407348 11236

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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402,385 - 1.8
402,389 + 0.6
402,527 + 1.8
402,680 + 0.1
402,973 - -0.4
402,977 + -0.3
403,015 - 1.4
403,389 - 2.3
403,578 + 11235 mRNA_2867 0.20 -0.3
403,931 - 11235 mRNA_2867 0.42 -1.1
403,937 + 11235 mRNA_2867 0.42 0.3
404,086 + 11235 mRNA_2867 0.51 -0.5
404,222 + 11235 mRNA_2867 0.60 -1.4
404,390 - 11235 mRNA_2867 0.70 -0.3
404,502 - 11235 mRNA_2867 0.77 0.2
404,521 - 11235 mRNA_2867 0.78 -0.4
404,800 + -0.4
404,829 - -0.6
404,835 + -1.0
404,998 - -0.0
405,001 + 0.4
405,009 - -0.1
405,010 + -0.0
405,020 - -0.1
405,028 + -0.1
405,029 - -1.0
405,049 - 0.7
405,077 - 0.2
405,080 + -1.6
405,130 - -0.8
405,143 - -0.7
405,157 + -0.7
405,162 - 1.2
405,167 + -0.0
405,168 - 0.6
405,186 + -0.1
405,202 + 0.6
405,214 - -0.1
405,229 + -0.0
405,241 - 0.8
405,250 - 0.1
405,262 + 0.4
405,266 + 0.2
405,269 + 0.7
405,274 + 0.1
405,341 + -0.0
405,378 - 0.6
405,383 + 0.1
405,394 + -0.3
405,396 + 0.2