Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2790

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2788: 11156 - HMMPfam-Protein of unknown function (DUF1183)-PF06682, at 218324 to 218690 11156 mRNA_2789: 11157 - Interpro SOCE-associated regulatory factor of calcium homoeostasis, at 218757 to 219433 11157 mRNA_2790: 11158 - Hypothetical Protein, at 219629 to 222406 11158 mRNA_2791: 11159 - K05544 DUS3 tRNA-dihydrouridine synthase 3, at 222568 to 225746 11159

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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218,723 - 0.2
219,127 - 11157 mRNA_2789 0.55 0.7
219,528 - 1.4
219,830 - -0.4
219,988 - 11158 mRNA_2790 0.13 -0.6
220,046 - 11158 mRNA_2790 0.15 0.9
220,410 + 11158 mRNA_2790 0.28 -0.4
220,755 - 11158 mRNA_2790 0.41 -0.2
221,463 + 11158 mRNA_2790 0.66 -0.0
221,661 + 11158 mRNA_2790 0.73 0.1
221,753 - 11158 mRNA_2790 0.76 -0.1
221,835 + 11158 mRNA_2790 0.79 1.6
221,875 + 11158 mRNA_2790 0.81 -0.5
222,068 + 11158 mRNA_2790 0.88 0.5
222,508 - -0.5
222,521 + 1.0
222,792 + -0.1
223,077 + 11159 mRNA_2791 0.16 -0.9
223,258 - 11159 mRNA_2791 0.22 0.9
223,376 + 11159 mRNA_2791 0.25 -0.5
223,376 + 11159 mRNA_2791 0.25 0.5