Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2727

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84881 to 85852 11094 mRNA_2727: 11095 - Hypothetical Protein, at 86121 to 88745 11095 mRNA_2728: 11096 - Hypothetical Protein, at 89021 to 89898 11096

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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85,197 + 11094 mRNA_2726 0.33 0.1
85,208 + 11094 mRNA_2726 0.34 0.1
85,489 - 11094 mRNA_2726 0.63 0.2
85,503 - 11094 mRNA_2726 0.64 0.2
85,761 + 0.4
85,785 - -0.7
85,908 + -1.0
85,926 - -1.1
85,949 + 0.4
85,961 - 0.7
85,970 + -1.3
85,978 + -0.1
85,986 + -1.1
86,033 + 1.3
86,033 - -0.3
86,042 - 0.9
86,044 + 1.0
86,067 + -0.4
86,072 + 0.2
86,080 + 0.1
86,102 + -1.2
86,634 - 11095 mRNA_2727 0.20 -0.0
86,708 - 11095 mRNA_2727 0.22 1.2
86,799 - 11095 mRNA_2727 0.26 -0.8
86,819 + 11095 mRNA_2727 0.27 0.0
87,841 - 11095 mRNA_2727 0.66 -2.2
87,842 + 11095 mRNA_2727 0.66 1.2
88,550 + 0.5
88,686 + 0.1
88,713 - -0.6
88,858 + -0.1
89,155 + 11096 mRNA_2728 0.15 0.9
89,421 - 11096 mRNA_2728 0.46 0.1
89,520 - 11096 mRNA_2728 0.57 -1.0
89,596 + 11096 mRNA_2728 0.65 -0.5
89,608 + 11096 mRNA_2728 0.67 -0.2
89,719 - 11096 mRNA_2728 0.79 -1.7
89,724 + 11096 mRNA_2728 0.80 1.0
89,725 + 11096 mRNA_2728 0.80 -1.6