Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2726

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2725: 11093 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 83546 to 84542 11093 mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84881 to 85852 11094 mRNA_2727: 11095 - Hypothetical Protein, at 86121 to 88745 11095

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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83,975 + 11093 mRNA_2725 0.43 0.3
84,242 - 11093 mRNA_2725 0.70 -0.5
84,298 - 11093 mRNA_2725 0.75 0.6
84,299 + 11093 mRNA_2725 0.76 1.6
84,310 + 11093 mRNA_2725 0.77 -0.2
84,317 + 11093 mRNA_2725 0.77 0.6
84,394 - 11093 mRNA_2725 0.85 0.2
84,428 - 11093 mRNA_2725 0.88 -1.3
84,439 - 11093 mRNA_2725 0.90 -0.6
84,440 + 11093 mRNA_2725 0.90 0.6
84,476 - 0.9
84,479 - 0.4
84,482 + 0.3
84,486 - 0.2
84,561 - -0.5
84,586 + 1.7
84,695 + 0.9
84,754 - -1.2
85,197 + 11094 mRNA_2726 0.33 0.1
85,208 + 11094 mRNA_2726 0.34 0.1
85,489 - 11094 mRNA_2726 0.63 0.2
85,503 - 11094 mRNA_2726 0.64 0.2
85,761 + 0.4
85,785 - -0.7
85,908 + -1.0
85,926 - -1.1
85,949 + 0.4
85,961 - 0.7
85,970 + -1.3
85,978 + -0.1
85,986 + -1.1
86,033 + 1.3
86,033 - -0.3
86,042 - 0.9
86,044 + 1.0
86,067 + -0.4
86,072 + 0.2
86,080 + 0.1
86,102 + -1.2
86,634 - 11095 mRNA_2727 0.20 -0.0
86,708 - 11095 mRNA_2727 0.22 1.2
86,799 - 11095 mRNA_2727 0.26 -0.8
86,819 + 11095 mRNA_2727 0.27 0.0