Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2725

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2724: 11092 - HMMPfam-Ribosomal protein L30p/L7e-PF00327,SUPERFAMILY--SSF55129, at 82286 to 82840 11092 mRNA_2725: 11093 - HMMPfam-NADH-ubiquinone reductase complex 1 MLRQ subunit-PF06522, at 83546 to 84542 11093 mRNA_2726: 11094 - K01725 cynS cyanate lyase, at 84881 to 85852 11094

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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82,935 - -0.5
82,948 - 0.1
83,202 - 0.1
83,215 - -0.5
83,218 - 1.0
83,402 - -1.4
83,522 - -1.1
83,686 + 11093 mRNA_2725 0.14 0.1
83,690 - 11093 mRNA_2725 0.14 -0.2
83,975 + 11093 mRNA_2725 0.43 0.3
84,242 - 11093 mRNA_2725 0.70 -0.5
84,298 - 11093 mRNA_2725 0.75 0.6
84,299 + 11093 mRNA_2725 0.76 1.6
84,310 + 11093 mRNA_2725 0.77 -0.2
84,317 + 11093 mRNA_2725 0.77 0.6
84,394 - 11093 mRNA_2725 0.85 0.2
84,428 - 11093 mRNA_2725 0.88 -1.3
84,439 - 11093 mRNA_2725 0.90 -0.6
84,440 + 11093 mRNA_2725 0.90 0.6
84,476 - 0.9
84,479 - 0.4
84,482 + 0.3
84,486 - 0.2
84,561 - -0.5
84,586 + 1.7
84,695 + 0.9
84,754 - -1.2
85,197 + 11094 mRNA_2726 0.33 0.1
85,208 + 11094 mRNA_2726 0.34 0.1
85,489 - 11094 mRNA_2726 0.63 0.2
85,503 - 11094 mRNA_2726 0.64 0.2