Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2666

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2665: 11033 - HMMPfam-Protein of unknown function (DUF3431)-PF11913, at 712409 to 714651 11033 mRNA_2666: 11034 - HMMPfam-Lipase (class 3)-PF01764,SUPERFAMILY--SSF53474, at 715009 to 717266 11034 mRNA_2667: 11035 - K05535 MNN2 alpha 1,2-mannosyltransferase, at 717860 to 720887 11035

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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714,658 + -1.0
714,969 + 0.9
715,691 + 11034 mRNA_2666 0.30 -0.5
715,720 + 11034 mRNA_2666 0.31 0.1
715,807 + 11034 mRNA_2666 0.35 -1.3
715,825 - 11034 mRNA_2666 0.36 -1.0
715,958 + 11034 mRNA_2666 0.42 -1.3
715,959 - 11034 mRNA_2666 0.42 -1.1
715,997 + 11034 mRNA_2666 0.44 -0.3
716,376 - 11034 mRNA_2666 0.61 -1.0
716,579 + 11034 mRNA_2666 0.70 0.2
716,597 - 11034 mRNA_2666 0.70 0.2
716,602 + 11034 mRNA_2666 0.71 1.1
716,699 + 11034 mRNA_2666 0.75 0.2
716,707 - 11034 mRNA_2666 0.75 -1.9
716,759 + 11034 mRNA_2666 0.78 0.3
716,762 + 11034 mRNA_2666 0.78 -0.7
716,776 + 11034 mRNA_2666 0.78 0.5
716,894 - 11034 mRNA_2666 0.83 0.4
716,924 - 11034 mRNA_2666 0.85 0.8
716,953 - 11034 mRNA_2666 0.86 0.2
717,048 - -0.9
717,069 + -0.0
717,107 - 0.6
717,216 + -2.0
717,226 - -0.6
717,229 - -0.2
717,230 + -2.5
717,231 - 0.3
717,243 - -0.4
717,243 - 0.3
717,245 - 0.0
717,245 - -0.3
717,248 + 0.1
717,248 - -1.1
717,250 - 1.7
717,251 + 0.1
717,253 + 1.4
717,258 + -0.5
717,268 - -0.0
717,272 + 1.6
717,275 - -0.5
717,279 + -0.8
717,279 + 2.6
717,279 + 0.5
717,303 + 1.1
717,326 + 1.3
717,354 + -0.4
717,426 + 0.2
717,438 - 0.7
717,443 + 0.9
717,447 + 1.0
717,448 - -0.3
717,449 + -0.7
717,456 - 0.1
717,456 - -0.0
717,456 - -0.1
717,466 + -0.4
717,595 - 1.5
717,597 - 0.3
717,622 + 0.3
717,633 + -2.1
717,645 - 0.6
717,649 - 1.2
717,656 + 0.4
717,668 - 0.2
717,791 + 0.3
717,798 - -2.1
717,807 + -0.6
717,809 + 3.0
717,915 + -2.2
718,111 + -0.3
718,226 - 11035 mRNA_2667 0.12 1.7