Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2661

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2660: 11028 - Hypothetical Protein, at 700726 to 702526 11028 mRNA_2661: 11029 - Interpro GDP-fucose protein O-fucosyltransferase, at 702625 to 704593 11029

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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702,007 + 11028 mRNA_2660 0.71 0.6
702,354 - -1.1
702,462 + -0.2
702,523 - 0.1
702,589 + -0.8
703,392 - 11029 mRNA_2661 0.39 0.6
703,829 + 11029 mRNA_2661 0.61 -1.1
704,089 + 11029 mRNA_2661 0.74 0.7
704,094 - 11029 mRNA_2661 0.75 0.9
704,831 + 0.7
704,953 - 2.4
704,958 + -0.1
704,964 - -0.3
704,973 + -0.7
704,979 + -0.7
704,995 + -0.1
705,012 + 1.2
705,108 - -0.3
705,120 - 0.2
705,120 - 0.2
705,122 - -2.0
705,127 + 0.2
705,132 - 0.3
705,134 - -0.6
705,137 - 0.8
705,140 - 0.8
705,140 - -0.8
705,142 + 0.1
705,149 - 0.1
705,149 - -0.8
705,151 + -0.7
705,153 - 0.2
705,172 + 0.4
705,182 + 0.0
705,184 - 1.7
705,191 + 0.1
705,203 - 0.5
705,216 + -0.7
705,216 + -0.2
705,224 - 1.9
705,226 + -0.4
705,227 + -3.4
705,235 - -0.0
705,238 - -0.6
705,240 + -2.1
705,243 + -0.4
705,244 + 1.0
705,249 + 0.5
705,252 + 0.8
705,254 - -0.1
705,257 + -0.7
705,315 + 1.4
705,342 + -0.6
705,347 - -0.6
705,354 + 1.4
705,354 + -0.2
705,363 - -0.6
705,373 - -0.0
705,379 - -1.7
705,380 - 0.1
705,386 - -0.0
705,388 - -0.7
705,394 + 0.6
705,402 - -0.6
705,436 + 0.2
705,439 + -0.6
705,441 - 0.3
705,448 + 1.3
705,455 - 1.4
705,464 + 0.2
705,489 - -0.5
705,499 - 1.8
705,508 + -0.1
705,512 - 0.4
705,513 - -0.5
705,515 - 0.2
705,516 - 2.2
705,520 - 0.9
705,524 + 0.9
705,530 + 0.1
705,530 + 0.1
705,531 - -0.1
705,532 + 1.3
705,533 + 0.2
705,534 + -0.2
705,536 + -0.6
705,540 - 1.3
705,541 - 0.7
705,543 - 1.3
705,545 - 2.4
705,546 - 0.6
705,548 + 0.4
705,551 - 0.8
705,552 + 0.4
705,553 + 0.6
705,556 - 0.6
705,561 + -0.3
705,562 + -1.5
705,563 - -0.4
705,564 + -0.0
705,565 + -0.2
705,569 + 0.1
705,569 + 0.0
705,576 - -1.3
705,582 - -0.3
705,588 - -1.1
705,592 + -1.8