Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2649

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2649: 11017 - K08157 TPO1 MFS transporter, DHA1 family, multidrug resistance protein, at 672957 to 675080 11017

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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672,228 - 0.7
672,230 + 0.7
672,232 - 0.0
672,233 - 1.1
672,235 - -0.0
672,245 + -0.4
672,246 + -0.6
672,364 - 0.3
672,706 - 1.5
672,787 + -0.6
673,263 + 11017 mRNA_2649 0.14 -0.8
673,379 + 11017 mRNA_2649 0.20 -0.7
673,402 - 11017 mRNA_2649 0.21 0.6
673,685 + 11017 mRNA_2649 0.34 -1.5
673,698 + 11017 mRNA_2649 0.35 -0.2
673,744 + 11017 mRNA_2649 0.37 1.0
673,840 - 11017 mRNA_2649 0.42 0.9
673,898 + 11017 mRNA_2649 0.44 -0.0
673,952 - 11017 mRNA_2649 0.47 0.9
674,144 - 11017 mRNA_2649 0.56 -0.9
674,173 + 11017 mRNA_2649 0.57 0.3
674,210 - 11017 mRNA_2649 0.59 -0.5
674,315 - 11017 mRNA_2649 0.64 -2.0
674,438 - 11017 mRNA_2649 0.70 1.3
674,462 + 11017 mRNA_2649 0.71 1.7
674,582 + 11017 mRNA_2649 0.77 1.0
674,593 - 11017 mRNA_2649 0.77 0.1
675,011 - 0.1
675,020 - -0.5
675,145 - 0.2
675,445 - -0.7
675,479 - 0.3
675,483 + 0.6
675,487 + -0.4
675,511 - -0.8
675,596 - -0.4
675,605 + -0.2
675,608 + -0.3
675,615 - 0.7
675,618 - 0.1
675,629 - 0.4
675,630 - -0.1
675,630 + 1.1
675,640 + 1.4
675,642 - -0.1
675,649 - -0.3
675,652 - -0.1
675,652 - 2.6
675,654 + -1.0
675,654 + 0.1
675,655 - 0.0
675,659 + 0.3
675,659 + -1.4
675,659 + -0.5
675,659 + -0.1
675,695 - 0.1
675,695 - 0.1
675,709 + 0.2
675,744 - 1.9
675,967 + 0.7
675,970 + -0.5
675,987 + 0.5
675,990 - 1.2