Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2626

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2625: 10993 - K20784 XEG113 arabinosyltransferase, at 618435 to 621494 10993 mRNA_2626: 10994 - Interpro GDP-fucose protein O-fucosyltransferase, at 621778 to 623321 10994 mRNA_2627: 10995 - K05941 E2.3.2.15 glutathione gamma-glutamylcysteinyltransferase, at 624250 to 625308 10995

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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620,813 - 10993 mRNA_2625 0.78 0.4
620,819 - 10993 mRNA_2625 0.78 0.6
620,851 + 10993 mRNA_2625 0.79 0.8
620,975 + 10993 mRNA_2625 0.83 1.7
621,110 - 10993 mRNA_2625 0.87 -0.9
621,138 + 10993 mRNA_2625 0.88 0.8
621,400 + 0.3
621,415 - 0.4
621,513 - -1.0
621,721 - -1.1
621,833 - -0.8
622,121 - 10994 mRNA_2626 0.22 -0.1
622,171 + 10994 mRNA_2626 0.25 -1.2
622,176 - 10994 mRNA_2626 0.26 1.0
622,302 + 10994 mRNA_2626 0.34 -0.7
622,347 + 10994 mRNA_2626 0.37 -0.4
622,385 + 10994 mRNA_2626 0.39 -2.0
622,453 + 10994 mRNA_2626 0.44 -0.8
622,582 - 10994 mRNA_2626 0.52 0.3
622,887 + 10994 mRNA_2626 0.72 -0.8
622,990 - 10994 mRNA_2626 0.78 1.5
623,181 + -0.3
623,305 - -0.4
623,452 - 1.0
623,457 - 1.2
623,460 + -0.8
623,461 + -0.7
623,586 + 1.6
623,608 + 1.0
623,620 - 0.5
623,622 - -0.1
623,627 - 1.2
623,631 - 1.9
623,752 + 0.2
623,761 + -0.9
623,764 - -0.6
623,771 - 0.2
623,906 + 0.3
623,908 + -0.9
623,913 + -0.4
623,919 + 0.8
624,074 + -0.2
624,167 + -2.1