Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2621

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2620: 10988 - ProSiteProfiles-Filamin/ABP280 repeat profile.-PS50194,SUPERFAMILY--SSF81296, at 609303 to 611052 10988 mRNA_2621: 10989 - K01711 gmd, GMDS GDPmannose 4,6-dehydratase, at 611391 to 613373 10989 mRNA_2622: 10990 - BLAST expressed protein [Schizophyllum commune H4-8], at 613719 to 614794 10990

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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610,424 - 10988 mRNA_2620 0.64 1.0
610,453 - 10988 mRNA_2620 0.66 -0.4
610,570 - 10988 mRNA_2620 0.72 0.2
610,864 + 10988 mRNA_2620 0.89 1.3
610,881 - 2.1
610,885 + 1.5
610,901 - 0.2
611,012 - -0.5
611,025 + 0.1
611,106 + 0.2
611,132 - -0.4
611,143 - -0.1
611,153 - 0.3
611,153 - -0.1
611,153 - -0.8
611,162 + -1.1
611,164 - 0.6
611,165 + -0.3
611,166 + -0.0
611,180 + 1.0
611,182 - -0.3
611,182 + -0.5
611,183 - -0.3
611,184 - 0.1
611,184 - 0.2
611,184 - 0.3
611,190 - 1.0
611,194 + 0.3
611,199 + -0.1
611,199 + -1.1
611,209 + -0.3
611,209 + 0.9
611,210 + -0.6
611,210 + -2.3
611,210 - 0.3
611,211 + -0.7
611,245 + -1.0
611,246 - 0.6
611,246 - 0.6
611,252 + 1.8
611,254 + 0.4
611,263 + -0.8
611,265 + 0.4
611,300 - -0.9
611,302 - -0.3
611,314 + 0.5
611,314 - 0.2
611,316 - 0.4
611,320 - -0.4
611,330 + -0.9
611,332 + -0.3
611,334 + 0.3
611,338 - 1.1
611,341 - 1.1
611,355 - 1.7
611,363 + 1.3
611,455 - 1.2
611,476 + 1.6
611,612 + 10989 mRNA_2621 0.11 1.2
611,614 - 10989 mRNA_2621 0.11 1.0
611,632 - 10989 mRNA_2621 0.12 1.9
611,632 - 10989 mRNA_2621 0.12 1.0
611,682 - 10989 mRNA_2621 0.15 1.6
611,746 - 10989 mRNA_2621 0.18 1.0
611,748 - 10989 mRNA_2621 0.18 2.9
611,749 - 10989 mRNA_2621 0.18 0.9
611,773 + 10989 mRNA_2621 0.19 0.1
611,792 + 10989 mRNA_2621 0.20 2.9
611,793 - 10989 mRNA_2621 0.20 3.8
611,805 - 10989 mRNA_2621 0.21 1.0
611,812 + 10989 mRNA_2621 0.21 1.1
611,819 - 10989 mRNA_2621 0.22 1.6
611,848 + 10989 mRNA_2621 0.23 3.0
611,891 - 10989 mRNA_2621 0.25 1.8
611,906 - 10989 mRNA_2621 0.26 1.5
611,929 - 10989 mRNA_2621 0.27 0.3
611,982 + 10989 mRNA_2621 0.30 -0.6
612,051 - 10989 mRNA_2621 0.33 2.2
612,063 + 10989 mRNA_2621 0.34 2.3
612,092 + 10989 mRNA_2621 0.35 0.6
612,350 - 10989 mRNA_2621 0.48 1.1
612,502 + 10989 mRNA_2621 0.56 1.5
612,583 - 10989 mRNA_2621 0.60 0.9
612,590 - 10989 mRNA_2621 0.60 1.4
612,619 - 10989 mRNA_2621 0.62 1.4
612,661 + 10989 mRNA_2621 0.64 -0.8
612,757 - 10989 mRNA_2621 0.69 1.3
612,769 - 10989 mRNA_2621 0.69 1.1
612,773 - 10989 mRNA_2621 0.70 1.4
613,053 - 10989 mRNA_2621 0.84 2.4
613,083 + 10989 mRNA_2621 0.85 0.5
613,213 - 1.4
613,369 - -0.0
613,463 - 0.1
613,465 - -1.2
613,466 + 0.7
613,480 - 0.7
613,514 + 0.2
613,514 - -1.2
613,516 - -1.3
613,521 + 0.4
613,530 + 1.8
613,658 + -0.4
613,788 - -0.5
613,865 + 10990 mRNA_2622 0.14 1.4
613,946 - 10990 mRNA_2622 0.21 0.1
614,053 + 10990 mRNA_2622 0.31 -0.3