Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2609

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2609: 10977 - Hypothetical Protein, at 588972 to 589930 10977 mRNA_2610: 10978 - HMMPfam-OsmC-like protein-PF02566,SUPERFAMILY--SSF82784,TIGRFAM-organ_hyd_perox peroxiredoxin, Ohr subfamily-TIGR03561, at 590070 to 590802 10978

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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587,994 + 1.0
588,144 - 0.4
588,146 + -0.3
588,298 - -0.9
588,301 + -1.6
588,497 + -0.8
588,583 + 0.9
588,590 - 0.4
588,604 + 1.5
588,651 - -1.5
588,763 - 0.8
588,790 - -1.6
589,112 + 10977 mRNA_2609 0.15 1.8
589,319 - 10977 mRNA_2609 0.36 -0.1
589,423 + 10977 mRNA_2609 0.47 -1.1
589,424 - 10977 mRNA_2609 0.47 1.3
589,531 + 10977 mRNA_2609 0.58 -0.7
589,709 - 10977 mRNA_2609 0.77 1.3
589,719 + 10977 mRNA_2609 0.78 -0.3
589,748 - 10977 mRNA_2609 0.81 0.1
589,857 + 0.0
590,272 - 10978 mRNA_2610 0.28 -0.1
590,403 - 10978 mRNA_2610 0.45 0.2
590,557 + 10978 mRNA_2610 0.66 -0.1
590,692 - 10978 mRNA_2610 0.85 1.6
590,845 - -0.2
590,848 + 0.2
590,861 + -0.5
590,869 + 2.0
590,888 - -0.5