Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2604

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2603: 10971 - Hypothetical Protein, at 573332 to 575202 10971 mRNA_2604: 10972 - BLAST Esterase, SGNH hydrolase-type domain protein [Rho..., at 575232 to 576935 10972 mRNA_2605: 10973 - K02370 EXTL3 alpha-1,4-N-acetylglucosaminyltransferase EXTL3, at 577060 to 580725 10973

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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574,289 + 10971 mRNA_2603 0.51 1.1
574,457 - 10971 mRNA_2603 0.60 -0.7
574,615 - 10971 mRNA_2603 0.69 0.3
574,630 - 10971 mRNA_2603 0.69 -0.1
574,960 + 10971 mRNA_2603 0.87 -1.0
575,099 + 0.1
575,269 + -0.1
575,325 - -0.0
575,337 + -0.0
575,673 + 10972 mRNA_2604 0.26 0.4
575,797 - 10972 mRNA_2604 0.33 -0.4
575,817 - 10972 mRNA_2604 0.34 1.0
575,817 + 10972 mRNA_2604 0.34 -1.5
575,825 + 10972 mRNA_2604 0.35 0.5
575,947 - 10972 mRNA_2604 0.42 0.1
575,973 - 10972 mRNA_2604 0.43 0.3
575,980 + 10972 mRNA_2604 0.44 -0.2
576,119 - 10972 mRNA_2604 0.52 0.7
576,370 + 10972 mRNA_2604 0.67 2.1
576,557 + 10972 mRNA_2604 0.78 -0.4
576,836 + -0.7
576,973 + -1.1
576,974 - -1.0
576,975 + 0.4
576,978 - 0.4
576,995 + -0.3
576,996 + -0.8
576,999 + 1.4
576,999 + -0.0
577,002 - -1.3
577,003 + -0.7
577,007 + -0.1
577,008 + 0.6
577,013 - 0.2
577,022 + 0.0
577,144 + 1.1
577,147 - 0.6
577,148 - -0.1
577,151 - 1.6
577,152 + 0.2
577,156 - 0.0
577,159 + 0.2
577,288 - -0.1
577,301 + 1.2
577,305 + -1.0
577,322 + -1.6
577,438 - 10973 mRNA_2605 0.10 -1.7
577,468 - 10973 mRNA_2605 0.11 0.9
577,589 - 10973 mRNA_2605 0.14 0.9
577,589 - 10973 mRNA_2605 0.14 0.2
577,598 + 10973 mRNA_2605 0.15 0.6
577,628 + 10973 mRNA_2605 0.15 1.0
577,693 - 10973 mRNA_2605 0.17 0.9
577,718 + 10973 mRNA_2605 0.18 -0.1
577,726 + 10973 mRNA_2605 0.18 -0.9