Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2589

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2588: 10956 - K03246 EIF3I translation initiation factor 3 subunit I, at 545209 to 547043 10956 mRNA_2589: 10957 - Hypothetical Protein, at 547993 to 548642 10957 mRNA_2590: 10958 - Hypothetical Protein, at 549148 to 549789 10958

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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547,096 + 0.5
547,235 + -0.7
547,249 + -0.4
547,269 + -0.4
547,400 - 0.2
547,692 + -0.7
547,762 - 0.9
547,972 - 1.4
548,122 - 10957 mRNA_2589 0.20 0.3
548,254 + 10957 mRNA_2589 0.40 -1.7
548,370 - 10957 mRNA_2589 0.58 0.4
548,488 - 10957 mRNA_2589 0.76 1.7
548,768 + -0.1
548,928 - 0.1
548,997 + 1.2
549,072 + 0.2
549,099 + -0.5
549,113 + 0.9
549,225 - 10958 mRNA_2590 0.12 0.2
549,239 + 10958 mRNA_2590 0.14 -0.6
549,287 + 10958 mRNA_2590 0.22 1.0
549,299 + 10958 mRNA_2590 0.24 -0.1
549,349 + 10958 mRNA_2590 0.31 -0.1
549,352 + 10958 mRNA_2590 0.32 -0.7
549,360 + 10958 mRNA_2590 0.33 0.4
549,365 - 10958 mRNA_2590 0.34 0.4
549,370 + 10958 mRNA_2590 0.35 -0.5
549,373 + 10958 mRNA_2590 0.35 0.2
549,374 + 10958 mRNA_2590 0.35 -0.2
549,375 - 10958 mRNA_2590 0.35 1.5
549,378 - 10958 mRNA_2590 0.36 -0.5
549,382 + 10958 mRNA_2590 0.36 -0.4
549,383 + 10958 mRNA_2590 0.37 0.7
549,385 - 10958 mRNA_2590 0.37 0.6
549,386 + 10958 mRNA_2590 0.37 0.4
549,391 + 10958 mRNA_2590 0.38 0.7
549,398 - 10958 mRNA_2590 0.39 -0.6
549,400 + 10958 mRNA_2590 0.39 -0.9
549,402 - 10958 mRNA_2590 0.40 1.4
549,406 + 10958 mRNA_2590 0.40 1.9
549,412 + 10958 mRNA_2590 0.41 -0.4
549,412 + 10958 mRNA_2590 0.41 1.1
549,414 + 10958 mRNA_2590 0.41 1.1
549,422 + 10958 mRNA_2590 0.43 -0.2
549,429 - 10958 mRNA_2590 0.44 -0.1
549,435 + 10958 mRNA_2590 0.45 -0.2
549,435 + 10958 mRNA_2590 0.45 -0.3
549,437 + 10958 mRNA_2590 0.45 -0.3
549,439 - 10958 mRNA_2590 0.45 -0.7
549,441 - 10958 mRNA_2590 0.46 0.9
549,442 + 10958 mRNA_2590 0.46 -0.5
549,443 - 10958 mRNA_2590 0.46 0.3
549,447 + 10958 mRNA_2590 0.47 -0.2
549,448 + 10958 mRNA_2590 0.47 0.5
549,448 - 10958 mRNA_2590 0.47 0.7
549,449 + 10958 mRNA_2590 0.47 -1.3
549,449 - 10958 mRNA_2590 0.47 0.3
549,461 + 10958 mRNA_2590 0.49 0.6
549,469 + 10958 mRNA_2590 0.50 1.1
549,469 + 10958 mRNA_2590 0.50 -0.1
549,470 + 10958 mRNA_2590 0.50 2.2
549,478 + 10958 mRNA_2590 0.51 0.4
549,479 + 10958 mRNA_2590 0.52 0.7
549,490 + 10958 mRNA_2590 0.53 0.2
549,508 - 10958 mRNA_2590 0.56 0.5
549,517 - 10958 mRNA_2590 0.57 1.1
549,533 + 10958 mRNA_2590 0.60 0.3
549,543 + 10958 mRNA_2590 0.62 -0.4
549,555 + 10958 mRNA_2590 0.63 -0.2
549,574 - 10958 mRNA_2590 0.66 2.4
549,574 - 10958 mRNA_2590 0.66 -0.1
549,575 + 10958 mRNA_2590 0.67 1.3
549,577 - 10958 mRNA_2590 0.67 0.3
549,578 - 10958 mRNA_2590 0.67 -0.5
549,581 - 10958 mRNA_2590 0.67 -3.3
549,583 - 10958 mRNA_2590 0.68 0.7
549,587 - 10958 mRNA_2590 0.68 -0.5
549,588 + 10958 mRNA_2590 0.69 0.1
549,593 - 10958 mRNA_2590 0.69 0.5
549,593 + 10958 mRNA_2590 0.69 -1.0
549,594 - 10958 mRNA_2590 0.69 0.8
549,595 - 10958 mRNA_2590 0.70 -1.7
549,596 + 10958 mRNA_2590 0.70 0.0
549,600 + 10958 mRNA_2590 0.70 -0.2
549,600 + 10958 mRNA_2590 0.70 1.0
549,605 - 10958 mRNA_2590 0.71 -0.0
549,606 + 10958 mRNA_2590 0.71 0.3
549,607 + 10958 mRNA_2590 0.71 -0.9
549,612 + 10958 mRNA_2590 0.72 0.2
549,614 + 10958 mRNA_2590 0.73 0.1
549,629 - 10958 mRNA_2590 0.75 -0.5
549,632 + 10958 mRNA_2590 0.75 -0.2
549,639 + 10958 mRNA_2590 0.76 -0.3
549,640 - 10958 mRNA_2590 0.77 0.2