Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2542

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2541: 10909 - HMMPfam-Hemerythrin HHE cation binding domain-PF01814, at 400071 to 401322 10909 mRNA_2542: 10910 - Hypothetical Protein, at 401521 to 403165 10910 mRNA_2543: 10911 - Hypothetical Protein, at 403439 to 404457 10911

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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401,016 + 10909 mRNA_2541 0.75 0.8
401,290 + -0.4
401,304 + 1.2
401,423 - 0.3
401,442 - 0.1
401,444 + 0.1
401,460 + -0.9
401,469 + -0.5
401,590 + 2.8
401,639 - -0.1
402,076 + 10910 mRNA_2542 0.34 -0.7
402,358 - 10910 mRNA_2542 0.51 1.7
402,379 + 10910 mRNA_2542 0.52 0.1
402,792 - 10910 mRNA_2542 0.77 -0.5
402,813 - 10910 mRNA_2542 0.79 -0.2
402,827 + 10910 mRNA_2542 0.79 0.2
402,941 + 10910 mRNA_2542 0.86 -0.2
403,062 - -2.3
403,063 + 1.1
403,069 + -1.2
403,374 + 1.2
403,396 + 0.6
403,419 + 0.8
403,633 + 10911 mRNA_2543 0.19 1.2
403,640 + 10911 mRNA_2543 0.20 0.2
404,000 - 10911 mRNA_2543 0.55 -1.0