Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2530

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2529: 10897 - K01613 psd, PISD phosphatidylserine decarboxylase, at 366940 to 368677 10897 mRNA_2530: 10898 - K14634 TIGAR fructose-2,6-bisphosphatase, at 368950 to 370646 10898

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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367,996 + 10897 mRNA_2529 0.61 -1.8
367,996 + 10897 mRNA_2529 0.61 -0.6
367,997 - 10897 mRNA_2529 0.61 -1.0
368,122 + 10897 mRNA_2529 0.68 0.5
368,172 - 10897 mRNA_2529 0.71 -0.3
368,180 + 10897 mRNA_2529 0.71 0.1
368,213 - 10897 mRNA_2529 0.73 -0.5
368,219 - 10897 mRNA_2529 0.74 -0.6
368,287 - 10897 mRNA_2529 0.78 0.9
368,747 - -0.5
368,761 + 1.1
368,772 + 0.0
369,193 + 10898 mRNA_2530 0.14 -1.6
369,440 + 10898 mRNA_2530 0.29 -0.4
369,446 + 10898 mRNA_2530 0.29 -0.3
369,574 - 10898 mRNA_2530 0.37 -1.0
369,653 - 10898 mRNA_2530 0.41 0.2
369,678 + 10898 mRNA_2530 0.43 -1.1
369,903 + 10898 mRNA_2530 0.56 0.6
369,987 - 10898 mRNA_2530 0.61 0.2
370,047 - 10898 mRNA_2530 0.65 0.7
370,056 - 10898 mRNA_2530 0.65 0.2
370,078 - 10898 mRNA_2530 0.66 -0.6
370,187 - 10898 mRNA_2530 0.73 0.0
370,188 + 10898 mRNA_2530 0.73 -0.9
370,195 - 10898 mRNA_2530 0.73 -0.3
370,200 + 10898 mRNA_2530 0.74 -2.1
370,227 + 10898 mRNA_2530 0.75 1.7
370,325 - 10898 mRNA_2530 0.81 0.7
370,356 - 10898 mRNA_2530 0.83 0.4
370,366 + 10898 mRNA_2530 0.83 -0.1
370,472 + 10898 mRNA_2530 0.90 -1.3
370,531 + 0.7
370,676 + 0.7
370,787 - -0.3
371,078 + 0.9
371,550 + 0.6
371,642 + -0.2