Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2486

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854 mRNA_2487: 10855 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 264187 to 266262 10855

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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262,677 + 0.4
262,724 + -2.4
262,759 + -0.2
262,811 - 0.2
262,959 - 10854 mRNA_2486 0.11 -0.3
262,960 + 10854 mRNA_2486 0.11 0.2
262,967 - 10854 mRNA_2486 0.12 1.9
263,096 - 10854 mRNA_2486 0.28 -1.0
263,407 - 10854 mRNA_2486 0.68 -1.3
263,438 - 10854 mRNA_2486 0.72 0.3
263,596 - 0.9
263,706 + 0.6
263,992 - 0.0
264,506 + 10855 mRNA_2487 0.15 -0.1
264,561 - 10855 mRNA_2487 0.18 -2.2
264,651 - 10855 mRNA_2487 0.22 1.0