Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2485

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2484: 10852 - K11498 CENPE centromeric protein E, at 257699 to 260992 10852 mRNA_2485: 10853 - K07760 CDK cyclin-dependent kinase, at 261080 to 262482 10853 mRNA_2486: 10854 - KOG3134 Predicted membrane protein, at 262874 to 263661 10854

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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260,231 + 10852 mRNA_2484 0.77 -0.2
260,285 - 10852 mRNA_2484 0.79 -0.6
260,327 + 10852 mRNA_2484 0.80 0.4
260,557 - 10852 mRNA_2484 0.87 2.1
260,571 - 10852 mRNA_2484 0.87 -0.1
260,582 + 10852 mRNA_2484 0.88 -0.7
260,793 + -1.5
260,850 + -0.2
261,008 + -0.6
261,016 - -0.5
261,100 + 0.0
261,487 + 10853 mRNA_2485 0.29 -1.0
261,612 + 10853 mRNA_2485 0.38 0.5
261,805 + 10853 mRNA_2485 0.52 -0.4
262,677 + 0.4
262,724 + -2.4
262,759 + -0.2
262,811 - 0.2
262,959 - 10854 mRNA_2486 0.11 -0.3
262,960 + 10854 mRNA_2486 0.11 0.2
262,967 - 10854 mRNA_2486 0.12 1.9
263,096 - 10854 mRNA_2486 0.28 -1.0
263,407 - 10854 mRNA_2486 0.68 -1.3
263,438 - 10854 mRNA_2486 0.72 0.3