Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2466

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2465: 10833 - K09291 TPR, MLP1, MLP2 nucleoprotein TPR, at 206394 to 209572 10833 mRNA_2466: 10834 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 210023 to 215249 10834

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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209,625 + 0.2
209,626 - 0.4
209,634 - -1.4
209,646 - -0.5
209,654 + 0.1
209,655 - -1.2
209,696 - -0.5
209,697 + -0.5
209,734 + -0.3
210,049 + -0.2
210,106 - -0.0
210,146 + 0.2
210,257 - -0.4
210,373 - -1.9
210,407 + 0.3
210,417 + 0.8
210,554 - 10834 mRNA_2466 0.10 -1.4
210,578 + 10834 mRNA_2466 0.11 0.3
210,670 + 10834 mRNA_2466 0.12 1.2
211,024 - 10834 mRNA_2466 0.19 -1.2
211,168 - 10834 mRNA_2466 0.22 -0.5
211,252 + 10834 mRNA_2466 0.24 -0.2
211,425 + 10834 mRNA_2466 0.27 0.4
211,478 - 10834 mRNA_2466 0.28 0.4
211,696 + 10834 mRNA_2466 0.32 -0.1
212,009 + 10834 mRNA_2466 0.38 0.2
212,146 - 10834 mRNA_2466 0.41 1.2
212,195 + 10834 mRNA_2466 0.42 -0.4
212,229 - 10834 mRNA_2466 0.42 0.8
212,539 - 10834 mRNA_2466 0.48 0.6
212,620 + 10834 mRNA_2466 0.50 0.3
212,843 - 10834 mRNA_2466 0.54 -0.2
212,857 + 10834 mRNA_2466 0.54 3.4
212,910 - 10834 mRNA_2466 0.55 -0.0
212,911 + 10834 mRNA_2466 0.55 -0.6
212,912 - 10834 mRNA_2466 0.55 0.7
212,913 - 10834 mRNA_2466 0.55 -1.4
213,019 + 10834 mRNA_2466 0.57 1.0
213,074 + 10834 mRNA_2466 0.58 1.1
213,482 + 10834 mRNA_2466 0.66 0.0
213,484 + 10834 mRNA_2466 0.66 0.2
213,648 + 10834 mRNA_2466 0.69 -0.6
213,899 + 10834 mRNA_2466 0.74 1.1
214,195 + 10834 mRNA_2466 0.80 0.5
214,334 + 10834 mRNA_2466 0.82 -0.8
214,479 + 10834 mRNA_2466 0.85 0.0
214,496 - 10834 mRNA_2466 0.86 1.1
214,896 + 0.7
214,913 + 0.2
215,195 - 0.4
215,204 - -0.1
215,220 + 0.8
215,223 + -1.4
215,245 - 1.3
215,260 + 0.5
215,348 - 1.8
215,375 + -0.2
215,507 - 0.3
215,511 - 2.2
215,542 - -0.4
215,638 - 0.0
215,662 + -1.7
215,668 - -0.2
216,081 + -0.8
216,117 - 0.2
216,141 - 0.4
216,168 + -1.0