Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2460

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2459: 10827 - KOG2747 Histone acetyltransferase (MYST family), at 186043 to 188568 10827 mRNA_2460: 10828 - SUPERFAMILY--SSF57997, at 188946 to 195534 10828 mRNA_2461: 10829 - Hypothetical Protein, at 195673 to 198074 10829

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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188,411 - 1.4
188,726 + -0.3
188,739 - -0.0
188,751 + -0.7
188,779 + 0.8
188,926 + -0.6
189,378 + 1.0
189,540 + -1.1
189,543 - 0.3
190,044 + 10828 mRNA_2460 0.17 0.2
190,075 + 10828 mRNA_2460 0.17 0.2
190,098 - 10828 mRNA_2460 0.17 -0.2
190,098 - 10828 mRNA_2460 0.17 0.9
190,247 + 10828 mRNA_2460 0.20 0.1
190,650 + 10828 mRNA_2460 0.26 -0.2
191,056 + 10828 mRNA_2460 0.32 0.2
191,480 - 10828 mRNA_2460 0.38 0.1
191,507 + 10828 mRNA_2460 0.39 -0.5
191,526 - 10828 mRNA_2460 0.39 -0.7
191,834 + 10828 mRNA_2460 0.44 -0.6
192,625 - 10828 mRNA_2460 0.56 0.5
192,898 - 10828 mRNA_2460 0.60 1.0
192,965 + 10828 mRNA_2460 0.61 1.0
193,082 - 10828 mRNA_2460 0.63 -0.5
193,261 + 10828 mRNA_2460 0.65 0.9
193,995 - 10828 mRNA_2460 0.77 -0.9
194,271 - 10828 mRNA_2460 0.81 1.8
194,278 - 10828 mRNA_2460 0.81 -0.0
194,525 - 10828 mRNA_2460 0.85 0.5
194,711 + 10828 mRNA_2460 0.87 -0.1
196,114 + 10829 mRNA_2461 0.18 0.2