Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2415

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2414: 10782 - KOG1185 Thiamine pyrophosphate-requiring enzyme, at 67466 to 70057 10782 mRNA_2415: 10783 - Hypothetical Protein, at 70099 to 71162 10783 mRNA_2416: 10784 - SUPERFAMILY--SSF51445, at 72061 to 74634 10784

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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69,123 - 10782 mRNA_2414 0.64 0.2
69,146 - 10782 mRNA_2414 0.65 -3.5
69,689 - 10782 mRNA_2414 0.86 -0.5
69,712 + 10782 mRNA_2414 0.87 -0.8
69,732 - 10782 mRNA_2414 0.87 -0.4
69,744 - 10782 mRNA_2414 0.88 -0.5
69,875 + 0.2
70,079 + -0.3
70,084 + 1.7
70,192 + 0.6
70,192 - -0.7
70,308 + 10783 mRNA_2415 0.20 0.3
70,478 + 10783 mRNA_2415 0.36 0.8
70,480 - 10783 mRNA_2415 0.36 1.6
70,499 - 10783 mRNA_2415 0.38 1.8
70,606 + 10783 mRNA_2415 0.48 -0.8
70,613 - 10783 mRNA_2415 0.48 -1.3
70,638 + 10783 mRNA_2415 0.51 0.1
70,675 - 10783 mRNA_2415 0.54 -1.2
70,901 + 10783 mRNA_2415 0.75 2.8
70,909 + 10783 mRNA_2415 0.76 -0.4
70,967 + 10783 mRNA_2415 0.82 -0.4
71,069 + 1.2
71,100 - 0.5
71,184 + 0.1
71,203 - -0.1
71,210 - 1.7
71,351 - -0.5
71,364 - 1.4
71,371 - -0.2
71,405 + 0.4
71,515 - -0.3
71,528 + -2.6
71,538 + 1.0
71,541 + 1.0
71,542 + 0.5
71,663 - -1.6
71,667 + -2.3
71,806 - -1.0
71,812 - 0.2
71,827 - -1.0
71,840 - 0.2
71,840 - 0.1
71,841 + -0.3
71,860 - -1.7
72,027 + 0.7
72,108 + 0.1
72,143 - 0.3
72,158 - 0.1