Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2380

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754598 to 756012 10747 mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748 mRNA_2381: 10749 - KOG4660 Protein Mei2, essential for commitment to meiosis, and related proteins, at 757956 to 760560 10749

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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755,397 + 10747 mRNA_2379 0.56 1.3
755,822 + 10747 mRNA_2379 0.87 -0.2
755,838 + 10747 mRNA_2379 0.88 -1.0
756,108 - 0.7
756,300 + 0.6
756,396 - -0.3
756,398 + -0.7
756,723 - 10748 mRNA_2380 0.37 -0.7
757,025 - 10748 mRNA_2380 0.70 0.5
757,303 + -0.0
757,461 - 0.0
757,607 + -0.3
757,630 + -0.2
757,715 - -1.6
757,865 - -2.3
757,877 + 1.0
757,879 - 1.2
757,881 - -1.7