Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2379

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2378: 10746 - Hypothetical Protein, at 753983 to 754459 10746 mRNA_2379: 10747 - HMMPfam-DASH complex subunit Duo1-PF08651, at 754598 to 756012 10747 mRNA_2380: 10748 - K07889 RAB5C Ras-related protein Rab-5C, at 756377 to 757308 10748

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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753,637 - 0.2
754,184 + 10746 mRNA_2378 0.42 1.9
754,363 - 10746 mRNA_2378 0.80 0.1
754,365 - 10746 mRNA_2378 0.80 2.2
754,536 - -0.3
754,564 - -1.7
754,571 + 0.5
754,816 + 10747 mRNA_2379 0.15 0.6
755,360 + 10747 mRNA_2379 0.54 -0.4
755,375 + 10747 mRNA_2379 0.55 0.1
755,397 + 10747 mRNA_2379 0.56 1.3
755,822 + 10747 mRNA_2379 0.87 -0.2
755,838 + 10747 mRNA_2379 0.88 -1.0
756,108 - 0.7
756,300 + 0.6
756,396 - -0.3
756,398 + -0.7
756,723 - 10748 mRNA_2380 0.37 -0.7