Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2336

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2335: 10703 - K20098 ERCC6L2 DNA excision repair protein ERCC-6-like 2, at 648018 to 653331 10703 mRNA_2336: 10704 - KOG0254 Predicted transporter (major facilitator superfamily), at 653967 to 656080 10704 mRNA_2337: 10705 - BLAST general substrate transporter [Wallemia mellicola..., at 656119 to 656520 10705

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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653,057 - 0.1
653,226 - -0.1
653,541 + 0.2
653,675 - 0.3
653,682 + 0.2
653,811 + 0.6
653,811 + 0.2
653,822 - -0.9
654,121 - -0.6
654,260 - 10704 mRNA_2336 0.14 -0.0
654,536 - 10704 mRNA_2336 0.27 -0.5
654,832 - 10704 mRNA_2336 0.41 -1.2
655,016 + 10704 mRNA_2336 0.50 -0.7
655,397 - 10704 mRNA_2336 0.68 0.3
655,696 + 10704 mRNA_2336 0.82 0.5
655,989 + -0.2
656,032 - 0.5
656,275 + 10705 mRNA_2337 0.39 1.5
656,277 - 10705 mRNA_2337 0.39 -0.0
656,283 + 10705 mRNA_2337 0.41 0.7
656,284 - 10705 mRNA_2337 0.41 0.8
656,373 - 10705 mRNA_2337 0.63 -0.8
656,417 - 10705 mRNA_2337 0.74 1.0
656,417 - 10705 mRNA_2337 0.74 0.3
656,430 + 10705 mRNA_2337 0.77 -0.8
656,430 - 10705 mRNA_2337 0.77 0.4
656,441 + 10705 mRNA_2337 0.80 0.0
656,474 + 10705 mRNA_2337 0.88 -0.1
656,589 + 1.7
656,589 - -0.6
656,591 - 0.3
656,606 + 0.6
656,612 + -1.3
656,626 + 0.4
656,629 - -0.2
656,629 + -0.4
656,637 - -0.4
656,663 + 0.6
656,672 + 1.7
656,672 - 0.8
656,679 - -0.1
656,682 + -0.7
656,688 + -0.4
656,724 + -0.4
656,742 + 0.2
656,755 - -1.1
656,778 - 0.8
656,791 - -0.2
656,816 - 1.0
656,816 - 0.4
656,832 + -1.5
656,856 - -0.1
656,890 - 0.7
656,899 - 0.4
656,901 - 0.7
656,921 - 0.6
656,923 - -0.3
656,923 - 0.6
656,925 - -0.1
656,930 - -0.4
656,945 + -0.9
656,960 + 0.5
656,960 - -1.1
656,961 + 0.1
656,978 + -0.2
656,978 - -0.8
656,980 - 0.1
656,987 - 0.3
656,990 + -0.3
656,992 - 0.2
656,997 - 0.2
657,029 - 2.0
657,039 + 2.5
657,067 - 0.4
657,077 + 0.1