Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2327

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2326: 10694 - K03439 trmB, METTL1 tRNA (guanine-N7-)-methyltransferase, at 614539 to 615888 10694 mRNA_2327: 10695 - Hypothetical Protein, at 616454 to 617684 10695 mRNA_2328: 10696 - KOG0192 Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs, at 617793 to 619842 10696

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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615,935 - 0.5
615,962 - 1.5
616,081 - 0.7
616,124 + 0.4
616,219 - 0.7
616,231 + -0.4
616,431 - -0.0
616,515 + -0.0
616,699 + 10695 mRNA_2327 0.20 -1.6
616,936 - 10695 mRNA_2327 0.39 -0.3
617,384 - 10695 mRNA_2327 0.76 -0.1
617,541 + 10695 mRNA_2327 0.88 -0.8
617,660 - -0.1
617,664 + 1.1
617,816 + -0.2
617,983 + -0.4
617,986 + -1.2
618,115 + 10696 mRNA_2328 0.16 -0.3
618,138 - 10696 mRNA_2328 0.17 1.7
618,265 - 10696 mRNA_2328 0.23 1.2
618,301 + 10696 mRNA_2328 0.25 -0.9
618,401 - 10696 mRNA_2328 0.30 -0.3
618,431 + 10696 mRNA_2328 0.31 -0.6
618,449 - 10696 mRNA_2328 0.32 0.6
618,457 + 10696 mRNA_2328 0.32 0.2
618,508 + 10696 mRNA_2328 0.35 -0.8
618,665 - 10696 mRNA_2328 0.43 -0.2