Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2289

Experiments: YNB Methylricinoleic Acid

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2288: 10656 - BLAST CLP1-like protein [Schizophyllum commune H4-8], at 535307 to 535861 10656 mRNA_2289: 10657 - KOG2454 Betaine aldehyde dehydrogenase, at 536074 to 538335 10657 mRNA_2290: 10658 - HMMPfam-GPR1/FUN34/yaaH family-PF01184, at 538803 to 539885 10658

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
remove
535,135 - 1.5
535,195 + -0.5
535,920 - 0.6
536,046 - -0.7
536,059 + 2.7
536,070 - -0.6
536,232 + -1.1
536,496 + 10657 mRNA_2289 0.19 -0.5
536,513 - 10657 mRNA_2289 0.19 -0.4
536,805 + 10657 mRNA_2289 0.32 -0.6
537,082 - 10657 mRNA_2289 0.45 -0.4
537,510 + 10657 mRNA_2289 0.63 -0.1
537,527 + 10657 mRNA_2289 0.64 -0.3
537,930 + 10657 mRNA_2289 0.82 -0.2
537,964 - 10657 mRNA_2289 0.84 -0.6
538,086 - 10657 mRNA_2289 0.89 -0.6
538,322 + 0.2
538,355 - 0.3
538,368 - 2.4
538,386 - -0.8
538,437 - -0.3
538,452 - -0.4
538,469 - -1.6
538,475 - -0.7
538,480 - 0.2
538,612 + -0.9
538,619 + -1.4
538,976 - 10658 mRNA_2290 0.16 0.2
539,126 - 10658 mRNA_2290 0.30 -0.8