Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2251

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2250: 10618 - HMMPfam-Apolipoprotein O-PF09769, at 464729 to 465798 10618 mRNA_2251: 10619 - KOG3313 Molecular chaperone Prefoldin, subunit 3, at 466202 to 467815 10619 mRNA_2252: 10620 - HMMPfam-Signal recognition particle 9 kDa protein (SRP9)-PF05486,SUPERFAMILY--SSF54762, at 468078 to 468584 10620

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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465,280 - 10618 mRNA_2250 0.51 -0.4
465,325 + 10618 mRNA_2250 0.56 -0.7
465,446 - 10618 mRNA_2250 0.67 -1.2
465,560 - 10618 mRNA_2250 0.78 0.7
465,572 + 10618 mRNA_2250 0.79 -1.6
465,572 + 10618 mRNA_2250 0.79 -0.6
465,736 - -0.1
465,742 + -0.5
465,744 + -1.5
465,992 + 1.9
465,993 - 0.0
466,010 + -1.0
466,029 - -0.8
466,142 - -0.3
466,158 + 0.2
466,699 + 10619 mRNA_2251 0.31 0.7
466,777 + 10619 mRNA_2251 0.36 1.9
466,863 + 10619 mRNA_2251 0.41 2.1
467,334 - 10619 mRNA_2251 0.70 -0.8
467,748 + -2.4
467,759 + 0.7
467,802 + -0.9
467,916 - 0.3
468,036 - -2.2
468,206 - 10620 mRNA_2252 0.25 1.5
468,629 + 1.1
468,794 + -0.6