Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2221

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2220: 10588 - K14411 MSI RNA-binding protein Musashi, at 388707 to 390951 10588 mRNA_2221: 10589 - KOG0379 Kelch repeat-containing proteins, at 391233 to 393813 10589 mRNA_2222: 10590 - K14801 TSR4 pre-rRNA-processing protein TSR4, at 394063 to 398428 10590

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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391,152 + -0.2
391,165 - 1.3
391,180 + -0.9
391,186 - -2.6
391,198 + -0.7
391,467 + -0.8
391,573 + 10589 mRNA_2221 0.13 0.5
391,586 + 10589 mRNA_2221 0.14 -0.2
392,059 - 10589 mRNA_2221 0.32 -0.3
392,188 - 10589 mRNA_2221 0.37 -0.3
392,197 - 10589 mRNA_2221 0.37 0.2
392,385 + 10589 mRNA_2221 0.45 0.2
392,420 - 10589 mRNA_2221 0.46 0.2
393,251 + 10589 mRNA_2221 0.78 0.2
393,550 - 10589 mRNA_2221 0.90 0.8
393,687 - -0.2
393,787 - -0.3
393,849 - -0.1
393,862 - 1.2
394,009 - -0.2
394,156 - -0.1
394,162 - 0.5