Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2175

Experiments: YNB Methylricinoleic Acid

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2174: 10542 - K14009 BCAP31, BAP31 B-cell receptor-associated protein 31, at 254027 to 255180 10542 mRNA_2175: 10543 - HMMPfam-Mus7/MMS22 family-PF09462, at 255474 to 261372 10543 mRNA_2176: 10544 - Hypothetical Protein, at 262297 to 263218 10544

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Methylricinoleic Acid
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254,503 - 10542 mRNA_2174 0.41 0.2
254,530 + 10542 mRNA_2174 0.44 0.9
254,560 - 10542 mRNA_2174 0.46 -0.5
254,566 - 10542 mRNA_2174 0.47 -2.5
254,705 + 10542 mRNA_2174 0.59 0.3
254,779 - 10542 mRNA_2174 0.65 -0.3
254,932 + 10542 mRNA_2174 0.78 -0.8
254,933 - 10542 mRNA_2174 0.79 0.6
254,938 - 10542 mRNA_2174 0.79 -1.6
254,946 + 10542 mRNA_2174 0.80 -0.5
254,955 + 10542 mRNA_2174 0.80 -0.2
255,100 - -0.7
255,208 + 1.8
255,246 - -0.7
255,251 + -0.6
255,281 - 2.2
255,415 - 0.5
255,845 - -0.5
256,246 - 10543 mRNA_2175 0.13 -1.8
256,612 + 10543 mRNA_2175 0.19 1.4
260,970 - -1.6
260,971 - -0.3
261,093 + 0.4
261,125 + 0.2
261,417 - 0.7
261,423 - 1.2
261,443 - 0.3
261,458 + -1.4
261,554 - 0.4
261,568 - 1.0
261,588 - 0.6
261,618 + 1.3
261,711 - 1.2
261,879 - -1.4
261,896 + 0.4
262,162 + -0.8
262,312 + 1.0